Gene Ppro_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1398 
Symbol 
ID4573614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand+ 
Start bp1491956 
End bp1492588 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID639755442 
Producthypothetical protein 
Protein accessionYP_901072 
Protein GI118579822 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000123271 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCCC TCACCCACCA TTATCCGCAC CAACGGCATC CGCATGGCCG TGTACCAAGA 
GGGGGCGGCT TTCCGCTGGT GCTCTGCCAC GGCTTCCCCG AGCTGGCCTT CTCATGGCGT 
CACCAACTCC CGGCCTTGGC CCGTGCGGGG TTTTGGGCCA TCGCCCCTGA CCAGCGCGGC 
TACGGAAGGA GCGACAAACC GGCTGCCGTG GAGGAGTACG ACCGAATAGA CTCGGTTGAA 
AAATTCCCGA TGCCCCTGGT AGACCTCCAG CAGCTCGCCA ACGGTCATGT CGGCAACCGA 
CCGCTCCACG ACCCGGCGCA CCAGGCCATC CAGGAAGAGC CCGTTGCTCT CAGCGATGCC 
GCCCAGTGCT ATGATCTCCA GCAGGCTGTC AATGGTGGTC CTGGTGTGCC CTCCTGTTTT 
AGTCGCTTTT TTGATTTCTT TCGCTCGTGG CCTTCCAGTG CGGCGTTGAC CCTGGCCACA 
TACGAGTCCG GCGGAGCGGG TAAATTAGGG CGCTGCTCTG CTCTCAGCGC TTCCCGTACC 
GCTTCAGTGA TGAGCCGCTT CAAGTCGGCT ATGTCGATCG TGACGGCGGG CATGATTATA 
TGTTGTAGGT CCTCGGCCGA ACCATGTTGG TGA
 
Protein sequence
MRSLTHHYPH QRHPHGRVPR GGGFPLVLCH GFPELAFSWR HQLPALARAG FWAIAPDQRG 
YGRSDKPAAV EEYDRIDSVE KFPMPLVDLQ QLANGHVGNR PLHDPAHQAI QEEPVALSDA 
AQCYDLQQAV NGGPGVPSCF SRFFDFFRSW PSSAALTLAT YESGGAGKLG RCSALSASRT 
ASVMSRFKSA MSIVTAGMII CCRSSAEPCW