Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1231 |
Symbol | |
ID | 4574117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1285187 |
End bp | 1287223 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639755271 |
Product | TonB-dependent receptor |
Protein accession | YP_900910 |
Protein GI | 118579660 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCACC CGTTCGTCAT TCTGTCACTC TGCAATGCCC TGGTCATGCC GCACATAATC GATTCCACTG CCCATGCGGA CCAGAATGAA ACAACCGCGC AACCAGATCA GCAGTCCACC GAAACAAAGA GTGCCGACAC CACCCTTGAC CGCATGGTCG TCACCGCCAC CAGAATCCAG GAATCCACCC TGGACATCCC CGCATCGGTT CAGGTCATCA CCCAGGAGGA GATCAGAACA TCATCGGCAC GGGACGCGGG CGAGCTGATG GCCGAGGCAG GCATCGGCCA CGTGCATAAG TACAACGGTG CCCAGACCGG CAACGTAGAG ATCAGGGGGC TTTCCACCGA CCTGTTCACC GAGAGCAGCA GCAGGGTGCT GCTGCTGGTG AACGGCAACC GGGCCGGCAC CACCAACATG GCCAAAATTC CGGCCAGCGA GATCGAGCGC ATCGAGATCG TAAAAGGTCC CGGCTCCGTA CTGTACGGTT CCCAGGCCAT GGGGGGTGTG ATCAACATCA TTACCAAACG CGGTACCGAG GAGGGAGTTC ACGGCTCCAT AGGCGCGGAG GGCGGTTCCT GGGGGTACTG GAAAAGCGGC GGCGATATAC ATGGCAAGAA ATACGGCATC GACTATTTCA TCTCCGGCGC AGCGTCGGCC AGCGACGACT ACCGCACACC AAAGGGTTCC TACGACAACA ACGCCTACGA GAGCGAAGAG CTTTCCACCC GGCTCGGCTA CAGTTTCCTG AACGACCACC GGGTTTCGGT CGGTTTCCAG CGCTGGGTCG GCAGGGACCT GGGCTCTCCC GGCGCGGTCT ACGCCAAGGA CCCGGACGAC TACTCCAAAA AGGCCCGTAA CTCCTTCGAT TTTGAATACA CAAACAAAAC CGCGACGCTC AAATACTACA TCAACAACAA CAAGGACGAC TCCTACAGCA CCGGCGGCAT GGGCATGCCC GGTCCGGGCA ACGCGGACCG GTTCACCTCC AACAACCGCT CCCAGGGGGT CAGCATCCAG AACGTCTTCC CCATCGGCGT ACACCGCATC ATCATCGGCG GACAGTGGGA CCGCAACTCC GTGGACACCT CCAGCAGCAG CGGCGCCCCC TACTATCCCG ATTCACGTTA CGACAACTAC GCCGCCTTCG CCGAGGGGAG GCTCAGCCTG CTGAAGGAAA AACTGCTGCT CACCGCCGGC GTGCGCTACG ACTACTTCGA CAACAACACC CTGTCAACCA AGGGGCTCAC CAGTACCCCC GTCTCCCGTA GCATGGATCA CGTCACCGGT CGGGGCGGCA TAGTCTACAA GATCACCGAC GGCCTCAGCC TGAAGGCTGC CATCGGAACG GCCTTCAGGG CCCCCTCCCC CCGAGAACTG GCCAGCGACT ACACCCTCTA CGGCTATCGT ACTCTGGGTA ACCGCGACCT GGGACCGGAG AAGAGCACCA CCTACGAGGG AGGGGTGGAG TACGCCAAAG ACCATCTCAA GGGGGGCTTC ACCTTCTTTC ACACCAGCTT CTCCCACAAG ATCGCCAGCT ACTACGACAG CGCCCTGGGA GCGACCAGCT ATAAAAACCT TTCCAGCGCC ACGATCCAGG GGATCGAGAT GAACGCGGCC TATGACGTCG GCCTGGCAGC CGGCCTGGAC ATTTCCGTCC AACCGTTTGC AAACGTCACC TACAAAACCA GATACGACGG TGAAAGCAAA GACAGCGCTA GCCACGGACA CCTGCTGAAC GTCCCCGAAT GGACCGGCGC CTTCGGTGTC AAAGCCGGCC AGGAGAAATG GGACGCAAAA CTGATCATCA ACTATTCGGG CAACGAGTAC ATCACGGACT ACTCCGCCTC CTATCCCTAT CCGGTGGTCA ACAAGGGGGG CTTCATGACA ATGGACATCA AGGGGGCCAT CCGTCCGCTG AAGAACCTGG AACTGACCCT CGCCGTGGAG AACCTGCTGG ACAGGTACTA CGAGTACATC AACGGCTATC CCATGCGGGG AAGAACCTTT GTGGGAGGGG CCAGGTGGAT TTTCTAA
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Protein sequence | MKHPFVILSL CNALVMPHII DSTAHADQNE TTAQPDQQST ETKSADTTLD RMVVTATRIQ ESTLDIPASV QVITQEEIRT SSARDAGELM AEAGIGHVHK YNGAQTGNVE IRGLSTDLFT ESSSRVLLLV NGNRAGTTNM AKIPASEIER IEIVKGPGSV LYGSQAMGGV INIITKRGTE EGVHGSIGAE GGSWGYWKSG GDIHGKKYGI DYFISGAASA SDDYRTPKGS YDNNAYESEE LSTRLGYSFL NDHRVSVGFQ RWVGRDLGSP GAVYAKDPDD YSKKARNSFD FEYTNKTATL KYYINNNKDD SYSTGGMGMP GPGNADRFTS NNRSQGVSIQ NVFPIGVHRI IIGGQWDRNS VDTSSSSGAP YYPDSRYDNY AAFAEGRLSL LKEKLLLTAG VRYDYFDNNT LSTKGLTSTP VSRSMDHVTG RGGIVYKITD GLSLKAAIGT AFRAPSPREL ASDYTLYGYR TLGNRDLGPE KSTTYEGGVE YAKDHLKGGF TFFHTSFSHK IASYYDSALG ATSYKNLSSA TIQGIEMNAA YDVGLAAGLD ISVQPFANVT YKTRYDGESK DSASHGHLLN VPEWTGAFGV KAGQEKWDAK LIINYSGNEY ITDYSASYPY PVVNKGGFMT MDIKGAIRPL KNLELTLAVE NLLDRYYEYI NGYPMRGRTF VGGARWIF
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