Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1402 |
Symbol | |
ID | 4538747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1385690 |
End bp | 1386460 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639746766 |
Product | xylanase/chitin deacetylase |
Protein accession | YP_892544 |
Protein GI | 118475714 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0167631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATAA CCGTTCTTAT GTATCATCAT GTTTTGCCAA AATCAGGATT TATCGCTAGC AGTCTTAATG AATTTGAGTC TCAAATGAGG TTTCTTAGTC AAAATGGTTA TAAAACTTTA AGTTCAGATG AGTTTTTGAA ATTTAAAAAA GGTGAGCTTA AACTACCTAA AAAGAGTATT TTTATAACTT TTGATGATGG TTGGCGAGAT AATTATTACT ACGCTTATCC TATTTTGAAA AAGTACGGTT TAAATGCGAC TCTGTTTTTA GTGACTAGCT GGATAGAAAA AGCAAGTGAG CAAAATGCAC TTAGAAAAGC TGAGTTTAGA CCGTTATCGC ATAAAGAAGC AAAACAAAAA ATTATCAGCG ATACTGCTGG TTTGTTTTTA AACTGGGACG AAGTGGAAAA AATGAAAGAT GTTTTTGATT TTCACTCTCA TACTAATGGA CACGATGATG CTTATTTTGG AAATTTAAGA TTTGAAGATG ATATTTTTGC TTGTAAAAAG ATCATAAAAG ATCGTTTAGG ATTTGATGAC GCCCATCTTT GTTGGCCGCG CGGGCAATAT GATAAAAGCA GATTACAAGC TGCAAAAGAG ATCGGTTATG AGATATTTTA TACCACAAAA CGAGGTATAA ATAAACCTGA CAATAATTTA AAATATATAA AAAGAGTTGC AGTTAAAAAA GATTATAAGT GGTTAAAAAA GACGCTATTC ATATATCAAA ATGATATTTT AGGAAGCTTT TACTCGGCTT TGAAGAATTG A
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Protein sequence | MSITVLMYHH VLPKSGFIAS SLNEFESQMR FLSQNGYKTL SSDEFLKFKK GELKLPKKSI FITFDDGWRD NYYYAYPILK KYGLNATLFL VTSWIEKASE QNALRKAEFR PLSHKEAKQK IISDTAGLFL NWDEVEKMKD VFDFHSHTNG HDDAYFGNLR FEDDIFACKK IIKDRLGFDD AHLCWPRGQY DKSRLQAAKE IGYEIFYTTK RGINKPDNNL KYIKRVAVKK DYKWLKKTLF IYQNDILGSF YSALKN
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