| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0089 |
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| Symbol | truD |
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| ID | 4539272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 72745 |
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| End bp | 73878 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639745487 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_891299 |
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| Protein GI | 118474715 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA CAGCCATTTT TAAACCGCTT TTAGGCACTA CGCATTCGCC TATAAACGCG
CATTTTAGTA AAAACGCAAG TGATTTTGTA GTTAGAGAAA ACCCTCTTTA TAGTTTTAGT
GGAAGCGGTG AGCATCTCGT TGTTGAAATT CAAAAAAAAG GTATGACGAC TTCCGAAGCC
CTTACTGTTT TAAGCAGGCA AAGCGGAGCA AAAATGCGTG ATTTTGGTTA TGCCGGGCTT
AAAGATAAAG AGGGGATGAC AACACAATTT ATTAGTATGC CGGCTAAATT TGAAAATGAA
ATTTCAAAAT TCAGCTACGA AAATTTAAAA ATCTTAAGTA TAACAAAACA TAATAATAAA
ATAAGAATCG GTCACTTAAA ATCAAACAGC TTTTTTATTC GTCTCAAAAA AGTCTTAGGA
AGTGAAGCTC TTAAACTTAA AGAGGCTTTA AAAACTATCG ATAAAAACGG CTATCCGAAT
TATTTCGGTT ATCAGAGGTT CGGTAGATTT GGAGATAATG CAAATAGTGG ATTTGAAATT
TTAAATAGTG CTTTAAACGG TGATAAATCG ATGTTTAAAA AGGCAAATCC AAAGTTAAGA
GATTTTTTAA TTTCAGCTTA TCAGAGCGAT CTTTTTAACA AATGGCTAAG CAAGAGAGTG
GAAATTAGCC GTTTTAGTGA AGATTTTAGC GCCAGGGAGC TTGAAGATAT ATATAAATTT
GATAAAACTA CTATAAAAAA TTTAAAATCC CAAAAACAAT TTTTTAAGCT TTTTCAAGGC
GAAGTTTTAG GTCATTATCC TTTTGGAAAG GTGTTTTTAT GCGAAGATTT AGAAGCCGAG
GTTGCTAAAT TTGGAGCAAG AGACAGAACA AGCTGCGGAT TGATAATCGG TTCTAAAGCG
TATGAAAGTA CAGGAGTTGC AAAGAGTTTA GAAGATGAAA TATTTAGAGA CGCTTATAAA
TTTAGTTCTT TTGTAAGCGG TTCAAGACGA TTTGCTTGGA TGTGGATTGA TAATTTAGAA
TATAAATATA ATGAAGAATC CGCACAGTTT AGCATAAGTT TTGCGCTACA AAAAGGTTCA
TATGCGACTG TTGTTTTGCG CGAAATTTTA GGTAGAGATA TTTTTGAAGA GTAA
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| Protein sequence | MENTAIFKPL LGTTHSPINA HFSKNASDFV VRENPLYSFS GSGEHLVVEI QKKGMTTSEA
LTVLSRQSGA KMRDFGYAGL KDKEGMTTQF ISMPAKFENE ISKFSYENLK ILSITKHNNK
IRIGHLKSNS FFIRLKKVLG SEALKLKEAL KTIDKNGYPN YFGYQRFGRF GDNANSGFEI
LNSALNGDKS MFKKANPKLR DFLISAYQSD LFNKWLSKRV EISRFSEDFS ARELEDIYKF
DKTTIKNLKS QKQFFKLFQG EVLGHYPFGK VFLCEDLEAE VAKFGARDRT SCGLIIGSKA
YESTGVAKSL EDEIFRDAYK FSSFVSGSRR FAWMWIDNLE YKYNEESAQF SISFALQKGS
YATVVLREIL GRDIFEE
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