Gene Acel_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1319 
Symbol 
ID4486372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1468312 
End bp1468761 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content61% 
IMG OID639730099 
Productsecretory protein 
Protein accessionYP_873077 
Protein GI117928526 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0113151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCAC GCATTCGTCA GAGGCGGCCG CGGGACGCTG GCTTCACGAT TCTTGAGCTC 
CTCGTCGTCA TGATCATCAT TAGCGTCCTC GCGGCGATAG CAATTCCCCT GTTTGCCGAC
CGCCAGAACG GCGGTTACGA GGCGAGTGAG AAGGCGGACC TTCATCACGT TCTGACGACG
ATTCAGAGCG TCATGGTTGA TCAACCGCAG AGTTTGACGG TCAACACCAC CGGTGCCAGC
TACACCGTGA AGACCGACGT CGATCCGGCC GGCGTCACCG GGACGCTCAG CGCTGGGAAC
AGCCTGAGCG TCAAACCGAT TCCGCCGATC GGCGTGGGGA CTGCGTACTG TCTGGAGGTC
CGTAACAGCC ATCCCAGCGT TTCGCCGTGG CATGCCGTCG TCAATCCCGC GGCAAATAGT
CAGCAGCTTG CTGTGGGTGC GTGTCCGTGA
 
Protein sequence
MVARIRQRRP RDAGFTILEL LVVMIIISVL AAIAIPLFAD RQNGGYEASE KADLHHVLTT 
IQSVMVDQPQ SLTVNTTGAS YTVKTDVDPA GVTGTLSAGN SLSVKPIPPI GVGTAYCLEV
RNSHPSVSPW HAVVNPAANS QQLAVGACP