Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1075 |
Symbol | trpA |
ID | 4485323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1185486 |
End bp | 1186289 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639729849 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_872833 |
Protein GI | 117928282 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00681111 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.362722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCG TCGGTGAGGC TTTGCGCCGG TGCCGCGCGG AGGGCCGTGC CGCGCTGGTG GGTTACCTGC CGGCGTGTTT CCCGGACGTC GAGCGCGGCA TCGCGAACCT CCAGGCCCTC CTCGACGGAG GCGTCGACAT CCTGGAAATC GGCTTGCCGT ACAGCGATCC CGTCCTCGAT GGGCCGGTTA TCGCCCGGGC CGCCGACGTG GCGCTCCGCG CCGGTTCCAC GACGGCTGCC GTCCTGCGCA CCCTCGAAGC GGTCGCGGCT TCCGGAGCCG CAGCCGTAAT CATGACGTAT TGGAATCCCG TCGAGCAGTA CGGCGTCGAC CGGTTCGCCG CAGCAGTGGC CGCCGCGGGA GGAAGCGGCC TCGTCACACC GGACTTGCTG CCCGATGAAG CGGAAGCCTG GCTGGCAGCC AGTGATGCAC ATGGCCTGGA TCGGATTTTT CTCGTCGCCC CAAGCTCGAC CGACGAACGG ATCGCGTTGA CCGTCCGGTT CTGCCGTGGG TTCGTCTATG CGGCGTCCGT GATGGGTGTC ACCGGCGTCC GGGAGCGGGC AAGCGTCCAA GCCCCGGAGC TGGTCGCCCG GGTCCGCCGT TATACGTCAC TGCCGGTTGG TGTCGGACTC GGCGTGGGCA CGGCCGAGCA GGCGGCGGAG GTCGCCCAGT ACGCTGACGC GGTCATCGTC GGTTCCGCGT TCGTGCGGTG TGTCTTCGAC GCCGGGGACG ACGCTCCGGC CGCGCTCCGC AAGCTCGCGG CCGACCTTGC CGCCGGGGTG CGCAGGATGC CGGCAACCGG GTAG
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Protein sequence | MTAVGEALRR CRAEGRAALV GYLPACFPDV ERGIANLQAL LDGGVDILEI GLPYSDPVLD GPVIARAADV ALRAGSTTAA VLRTLEAVAA SGAAAVIMTY WNPVEQYGVD RFAAAVAAAG GSGLVTPDLL PDEAEAWLAA SDAHGLDRIF LVAPSSTDER IALTVRFCRG FVYAASVMGV TGVRERASVQ APELVARVRR YTSLPVGVGL GVGTAEQAAE VAQYADAVIV GSAFVRCVFD AGDDAPAALR KLAADLAAGV RRMPATG
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