Gene Acel_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0110 
Symbol 
ID4484553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp113562 
End bp114851 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content65% 
IMG OID639728873 
Productmajor facilitator transporter 
Protein accessionYP_871872 
Protein GI117927321 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGGG CCCTTGCGGT CCGCAACTAC CGGCTGTACG CCACCGGCCA ACTGGTCTCC 
AATACCGGGA CGTGGATGGC CCGGGTCACG CAGGATTGGC TCGTTTACCA CATCCTGACC
CGCGATAACA GCTTTGCGCT CGGCGCCGTG ACAGCTCTGC AATTCCTGCC CACCCTGCTT
TTCGGGATGC ACGGAGGCCT GCTGGCCGAT CGCTACCCGA AGCGTAGGGT CCTCGTCGGC
ACCCAGAGCG CGATGGCGCT GCTCAGCATC GTGAGCGGCG TTCTCATCGC GACGCACGTC
ATCGCTCTGT GGTCCATTTC CGTCATCGTG TTCCTGTTCG GCATCGCTTC TGCGTTGGAC
ATGCCGGTCC GGCAGGCCTT TGTCGTGGAA ATGGTCGGGC GGGAACTTGT CCAGAACGCG
GTGAGCTTGA ATTCCGCCAC GTTTAATGCG GCGCGCCTGA TCGGTCCCGC CGTGGCGGGC
GTGCTCATTG AAGCTTTCGG CACCGCGCCG TCGTTTTTCC TCAACGCCGC CTCGTACCTC
GCCGTCATCG GCGTCCTCGT CGCGATGCGC GCCGACGAGC TTCGGGTCGC CCCCCGAGTG
GGACGGCGCG CCGGTCAGCT GCGGGAGGGA TTGCGCTATG TCGCAGAGCA TCCGGAGCTC
GCCATCCCGA TCGCCTTGAT CGGGCTGGTC GGCACGTTCG GTTTGAATTT CCCAATCACC
AATGCCTTGA TGGCCCGCGG GGCCTTCCAT CAGAACGCCG GCGGCTACGG GCTTCTGTCG
ACCACGCAGG CGATCGGCGC GGTGATCGGT GCATTGGCCA CGGCACGCCG ACGCCGGCGG
CCGCGGTTGC GCCTCCTCTT CGGATTGGCA ACAGTTTTTG CGTTGTTCGA AGGACTTTCC
GGGCTTGCGC CCAGTTATCT CATCTTTGCC GTACTCCTCA TCCCGATCGG CGCAGCAGCC
ATTGCCTTTG CGACGTCGTG CAATTCCAGC GTGCAATTGG GCGCCAAGCC GGCGATGCAG
GGACGGGCGA TGGCGCTGTA CGTCACGGTG TTCACCGGAG GAACTCCGGT CGGCTCCCTG
CTGGTCGGTT GGCTCGGCAA TGTTCTGGGA CCGCGCGGGA CGTTGGCCGT TCAAGGCCTG
ATCTGCGTCG TCAGTGCTGT CGCCGTGGCT GCTGTCTATG CCCGTCGCCT CGGTTGGCGA
CGGCCGCCTT TCACCCGCAG GCGCCGCCGC GGTGGTCTGA CCGCGGCCGA GATCGCGGAA
CCCACGCTTG CGGATGTGAG TACTCGGTGA
 
Protein sequence
MFRALAVRNY RLYATGQLVS NTGTWMARVT QDWLVYHILT RDNSFALGAV TALQFLPTLL 
FGMHGGLLAD RYPKRRVLVG TQSAMALLSI VSGVLIATHV IALWSISVIV FLFGIASALD
MPVRQAFVVE MVGRELVQNA VSLNSATFNA ARLIGPAVAG VLIEAFGTAP SFFLNAASYL
AVIGVLVAMR ADELRVAPRV GRRAGQLREG LRYVAEHPEL AIPIALIGLV GTFGLNFPIT
NALMARGAFH QNAGGYGLLS TTQAIGAVIG ALATARRRRR PRLRLLFGLA TVFALFEGLS
GLAPSYLIFA VLLIPIGAAA IAFATSCNSS VQLGAKPAMQ GRAMALYVTV FTGGTPVGSL
LVGWLGNVLG PRGTLAVQGL ICVVSAVAVA AVYARRLGWR RPPFTRRRRR GGLTAAEIAE
PTLADVSTR