Gene Shewana3_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3786 
Symbol 
ID4479996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4546917 
End bp4547648 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content37% 
IMG OID639728399 
Productchemotaxis protein MotB-related protein 
Protein accessionYP_871410 
Protein GI117922218 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAT TATTTACGCG AGGAAGCACA AAAGTTGATG AAGAAAACCC ATATTGGATG 
TCCTTCTCTG ACTTGATGTC TGGGCTATTA GTGATTTTTA TATTAGCAGC CGTAGCCTTA
ATTATTGAAT TAACTCAGAA GTCTGAACAG ATTGATGCCA GTATCGAAGA GTTGAAAAAG
GCAGAGGAAG CAAGAAGAAA TATCTTAATT GATATCAAAG AGGAATTAGC CAAACAGAAT
ATTCATGTTG AAATCGTTGA AAACGATACA GTACTTCGTA TACCGGAAAG TACATTGTCT
TTTGAATCCG GCAAAGATAC CTTGCCTGAA AATACGACTG TAAAAAATGA AGTTCGATTG
ATTGGCATCG CACTACATAA AGCAATAACA ACAAATGAAA GATGGAAATA TCTCGATACG
GTATTCGTTG AAGGACATAC CGATAGCAAT GGCATATGGT ACCGAGGCAA AGGGAATTGG
GGTCTTTCAA CGGATAGAGC TGTGTCAATT TGGAAGTTGT GGCAAACAGA GATTAATGTA
GCTCCCAAAT TAAGTGTTCT AACAAACTAT AATGGTCAGC TTTTATTTTC TGTAAGTGGA
TATGCAGATA CTCGACGAGT TGATTTACAA GAGACAACAG AAGAACAAAG AGCAAGAAAC
AGGCGAATAG ATATAAGATT CACCGTCAAA AAACCTAAGA TTGAAGATTA CGAAAAAGCG
AAGAATGTTT AA
 
Protein sequence
MDRLFTRGST KVDEENPYWM SFSDLMSGLL VIFILAAVAL IIELTQKSEQ IDASIEELKK 
AEEARRNILI DIKEELAKQN IHVEIVENDT VLRIPESTLS FESGKDTLPE NTTVKNEVRL
IGIALHKAIT TNERWKYLDT VFVEGHTDSN GIWYRGKGNW GLSTDRAVSI WKLWQTEINV
APKLSVLTNY NGQLLFSVSG YADTRRVDLQ ETTEEQRARN RRIDIRFTVK KPKIEDYEKA
KNV