Gene Shewana3_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2723 
Symbol 
ID4479127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3254148 
End bp3255077 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content49% 
IMG OID639727329 
Producthypothetical protein 
Protein accessionYP_870356 
Protein GI117921164 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.297419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTG ATCCAACGAT AAAAGCAGTT ATCCTGCTGA TTATCTGTAC CTTCTTTTGG 
GGGAGTTGCT TTCCCATTGG CAAACAAGTG TTAAGCGAAG TGCATGCCTT GACCTTAGTG
TTCTGGCGCT TTGTGATTGC CGCGGTCTGT CTCGCGATTT ACCTCAAGCT CGTCCGTATG
CCGAAATTGC ACTTAAGCAT CAATCAATGG CTGTGGATTA TCCTCGTCAG CGCGGTAGGT
ATAGGCGGGC TAAACCTGGG TCTATTCACG GGATTGGCGT CAACTAATGC GACAAACGGC
TCATTAATCA TGGCCCTTAG CCCGCTCATC ACGTCACTGA TTGCCTGTGT TACCCTGCGT
ACGCTGCCAT CATTTGCCCA GTGTTTTAGT CTGCTGGTGA GTCTCACCGG TGTGCTGATG
GTGATCACCA ATGGGCACCT TGAAACCCTC TTCTCGATGC AGATAAACCA CGGAGATAAA
TTAATATTTG GCGGGATGCT GGCCTGGAGT TTTTACACCT ATTTCAGTCA AGGTATCAGC
CGCTGGATGC CAGTAATCCC CTATACCTTT ATCGGCATGT TGAGTGGCGC TGCCGTGATT
GGCGCTTTAT GTTTGGCATC GCCAGAGGTG CATCCCTTCG CTGAGTTATT CAATAGTACG
GCGCTAGGCA TGGCCGAAGT CGTCTATATC GGCGTATTTG GTACGGTTGC AGGCTATTTA
TTGTGGCTAA ATGGCGTGCG TCAGTTAGGC TCAGCCAACG CAGCACTGTT TTTTAACTTT
GTCCCCATCT TCTCCGTATT AACCTCGTTT ATGCTCGGCC AAGCCGTTAC CGAGTTGCAA
CTGTTAGGGA TTATCGTTGT TATCGCAGGC TTACTGCTAC CGCGAATTAT TCGGTTTAAA
CGCGAGCCCA AAGTGTGCCC TGAATCCTAG
 
Protein sequence
MKSDPTIKAV ILLIICTFFW GSCFPIGKQV LSEVHALTLV FWRFVIAAVC LAIYLKLVRM 
PKLHLSINQW LWIILVSAVG IGGLNLGLFT GLASTNATNG SLIMALSPLI TSLIACVTLR
TLPSFAQCFS LLVSLTGVLM VITNGHLETL FSMQINHGDK LIFGGMLAWS FYTYFSQGIS
RWMPVIPYTF IGMLSGAAVI GALCLASPEV HPFAELFNST ALGMAEVVYI GVFGTVAGYL
LWLNGVRQLG SANAALFFNF VPIFSVLTSF MLGQAVTELQ LLGIIVVIAG LLLPRIIRFK
REPKVCPES