Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0983 |
Symbol | |
ID | 4477511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1153788 |
End bp | 1155959 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725517 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_868624 |
Protein GI | 117919432 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.698273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.622732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTTA TTTTTGGAGT AAAAATGGCT GTTTATATTA GCCACAAGCG CTCGGCATTC GTGCTGGGCG TGGCGTTATT GGCGTTGGAT GCGAGTGTTC CCCTATTGGC CGCCGAGGCT ATGCCAACTG ATACCGTTGG ACTTAATGGC GATATCGAGC GTTTAAGTAT TCATTATCGT CAGGCATACC GCGGCAATGT GCCGGCGACT GAGTTGCCCC AGGCAATTAC TGTGCTGGAT GAGCAACTGA TTAAAGATAC TGGGCTGACG CGTTTTCAAG ACTTATTGGA TTATTCCGCC AGTGTCGCGC GGCAAAATAA CGGTGGTGGG TTATGGGATA GTTTTTCGTT ACGGGGCTTT CCTGGGAATG AAAACATGCC ATCGGGCTAT TTAATCAATG GTTTTAATGG TGGCCGAGGT TTTAGCGGCC ACAGAGACCT ATCGAACGTG GCCTATGTGG AAATTCTCAA AGGCCCGGGC TCGGCGCTTT ATGGACGCTC GGAGCCCGGC GGCACTGTAA ATATTGTGAC TAAAAAGCCG CAGTACGAGG CGCAGGGCTA TTTAAAAGCC TCCGCGGGGA GTTTTGATCA ATATCGGTTA GAAGGGGATT TTACTTCGGG GCTGACTGAT AGCTTAGCTT TTAGGATCAA TGGTGCTTGG CAGGAACATG ACAGTTTTCG CGATTACGTG TTTAGCGATA AAAAAATCGT CACACCATCG CTGCGTTGGC AACTGTCGGA TAGGTCATCG CTCCTGTATG AGGTTGAATA TCTTAAACAA GAACAGTTAT TTGACCGTGG TGTAGTAGTG CTCAATAACG ATTTTAATAC CGTGTCCCGT TCGCGTTACT TGGGCGAGCC CAATGATGGG CCAACAAAAG TGGATGCGAC TGGGCATCAG CTTACCTATG AGTATGAATT GAATGAGGAT TGGTCGCTGA CCGCGGGTTA TAACTATCGC GATTCGAGTT TAAATGGCTA CTCTTCGGAT GCTGAATTAG CAAAGGGGCG TCAATCCTTA TATGACGATG GCCGTACGCT GACGCGGCAG CATCGTTATC GAGATTATGC TTCTGAAGAC CATTCAGTGC GGGCCGAACT CAGCGGTCAG TTTGATACTG GTAGCATAAG GCACAATCTG CTGCTCGGAA CGGATGCCTA TCATTATCGA CTGAAAACGG GACTCTACCG TTATCGAGGC CAGAAGGGCG CCTATGCTAT CGATATTTTT ACCCCCCAAT ATGGCGCTGC TCAGCCTGAG GTGAGTCTGT TGTATGAAAA CCGAGAGACT CAAGATGCTT GGGGTGCCTA TTTACAGGAC CAATTGGAGT TAACCGAGCG TTGGAAACTG CATTTAGGGT TAAGGTTTGA CCGTTATTCC CAAGAAATCG CAGAGCAGGT CAACGCGAGT CTGTCGGATC AAAGCGATCA CAGGGTCAGC CCGAAAGTCG GATTAGTGTA CCAATGGTCT GAGGCGCTAA GTGTTTACGG TTCCTATTCG GAAGGATTTT TACCGCTTTC AGGCACTGAT TATGCGGGTA ATCCCTTCGA GCCAGAGGAG AGCAAATCCG TCGAGTTGGG GGTTAAGTTC AACAGCACTT GGTTTGAGCT ACCCGTCAAT GGCAGTTTGG CTTGGTTTGA TGCGCAAAAG AGCAATATCT TGACCTCAGA TCCCGTCAAT GTTGGCTTTT CGGCGACCCT TGGTGAAGCC AAGAGCACGG GGATTGAATT GGATATTACG GCCGAGTTGA CCGAGAACTT ACAAGCGTCC TTGTCCTATG CCTACCTGAA TACCCGGACG GCGAACGACA GTCTGAATCT AGATTGGGGC GTGTTAATTC CGGCGGGCAG TCCGTTGGTC AATGTGCCAA AACACACGGG CAGTGTCATT CTCAAACAGG ACTTAAATGA TCTTTCTATC GACGGTCATT TAGGGTTGAG TTGGCGTTAT GTGGACTCAC GCTTGGGCGA TTCGGCCGAT CCAAGTTTTC AATTACCGAG TTATCAGTTG CTTGGAATGT TCTTCACTAC TCGGCTTGGC GAAAATCTAA GTCTCGCGCT CAATGTCGAT AACCTGCTGG ATGAGCACTA TATCGCCAGC AGTTACTCGG CGCTGTGGGC CGTACCGGGT GAGCCACGTA ACGTTAAAGT GAGTGTTAGC TATGAATTCT AA
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Protein sequence | MLFIFGVKMA VYISHKRSAF VLGVALLALD ASVPLLAAEA MPTDTVGLNG DIERLSIHYR QAYRGNVPAT ELPQAITVLD EQLIKDTGLT RFQDLLDYSA SVARQNNGGG LWDSFSLRGF PGNENMPSGY LINGFNGGRG FSGHRDLSNV AYVEILKGPG SALYGRSEPG GTVNIVTKKP QYEAQGYLKA SAGSFDQYRL EGDFTSGLTD SLAFRINGAW QEHDSFRDYV FSDKKIVTPS LRWQLSDRSS LLYEVEYLKQ EQLFDRGVVV LNNDFNTVSR SRYLGEPNDG PTKVDATGHQ LTYEYELNED WSLTAGYNYR DSSLNGYSSD AELAKGRQSL YDDGRTLTRQ HRYRDYASED HSVRAELSGQ FDTGSIRHNL LLGTDAYHYR LKTGLYRYRG QKGAYAIDIF TPQYGAAQPE VSLLYENRET QDAWGAYLQD QLELTERWKL HLGLRFDRYS QEIAEQVNAS LSDQSDHRVS PKVGLVYQWS EALSVYGSYS EGFLPLSGTD YAGNPFEPEE SKSVELGVKF NSTWFELPVN GSLAWFDAQK SNILTSDPVN VGFSATLGEA KSTGIELDIT AELTENLQAS LSYAYLNTRT ANDSLNLDWG VLIPAGSPLV NVPKHTGSVI LKQDLNDLSI DGHLGLSWRY VDSRLGDSAD PSFQLPSYQL LGMFFTTRLG ENLSLALNVD NLLDEHYIAS SYSALWAVPG EPRNVKVSVS YEF
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