Gene Shewana3_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0347 
Symbol 
ID4479083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp379699 
End bp380595 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content51% 
IMG OID639724879 
Producthypothetical protein 
Protein accessionYP_867996 
Protein GI117918804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000040068 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTA ATCAAGATGA TAGAATTACA CCTCAAGAAA CCTCCTCAAG CAGTAATCGC 
TTTGCTTTGA TTGCGATTGT GCTCGTCGTG CTGCTCTCTG CGGGAGGTTA TTATTACTAC
ACCAAAGATG ACTCACCCAA GCTCATCCCC AATGCGCCGA TAGTGCTGCC TGAGCCGCCT
TCATCTGAAC CAATGACGCT CGAAACAGGC ACTGAGCCTG AAACCGCGCC GGTGGAAAAT
GAAACCCCAG CGGCGACCAC GACGGAAACC GAAACCACGG TCACGCCAAC CGAGCCTGCG
ATTCCAGAAG AAGTCGTCCC CAGCCTGCCT GAGAGCGATG CCTTTGTGCA TCAAAAAGCG
CTGGCGATCA TCAATAACAA CGTGGTCGGC TCCTCCTTAG TGAACCAAGA TTTGGCCCGT
CAGTTTGTGG TGTTCGTGGA CAACTTGGCC CAAGGCGATC TCGCCCGCAA AGTCAGCCCA
GTCAAAGGCC CAGAAAAGCT GTTCACTGTG TCTGAAATAA CGAGCAAAGT GTATTTAAAT
CCAGAGAGTT ACCACAGATA TGACGCCTAC GCGACTGTGA TTGCCAGCAT GGATGAGCAA
ACCTTAATGC ACACCTACAA ACAGCTCACG CCGCTGTTTG ACGAGGCCTT TGCCGAATTG
GGTTACAGCA ATGCCAAGTT CAATGACAGA ATGCTGCAAG CCATTAAGAT CATGCTCGCA
GCTCCTATCA TCGAAGAGCC TATTGAGCTG AGCTCAATCA GCGTGAACTA CCGCTTTGTG
GATCCTAATC TAGAAGCCTT ACCGAGCGCG CAAAAACTGA TGATCCGCAT GGGGCCAGAA
AACACCCGTA AAGTGAAAGC GGCGCTGCGT AAATTGGAAA ACCAACTCGC CCAGTAA
 
Protein sequence
MQVNQDDRIT PQETSSSSNR FALIAIVLVV LLSAGGYYYY TKDDSPKLIP NAPIVLPEPP 
SSEPMTLETG TEPETAPVEN ETPAATTTET ETTVTPTEPA IPEEVVPSLP ESDAFVHQKA
LAIINNNVVG SSLVNQDLAR QFVVFVDNLA QGDLARKVSP VKGPEKLFTV SEITSKVYLN
PESYHRYDAY ATVIASMDEQ TLMHTYKQLT PLFDEAFAEL GYSNAKFNDR MLQAIKIMLA
APIIEEPIEL SSISVNYRFV DPNLEALPSA QKLMIRMGPE NTRKVKAALR KLENQLAQ