Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0347 |
Symbol | |
ID | 4479083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 379699 |
End bp | 380595 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639724879 |
Product | hypothetical protein |
Protein accession | YP_867996 |
Protein GI | 117918804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000040068 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTTA ATCAAGATGA TAGAATTACA CCTCAAGAAA CCTCCTCAAG CAGTAATCGC TTTGCTTTGA TTGCGATTGT GCTCGTCGTG CTGCTCTCTG CGGGAGGTTA TTATTACTAC ACCAAAGATG ACTCACCCAA GCTCATCCCC AATGCGCCGA TAGTGCTGCC TGAGCCGCCT TCATCTGAAC CAATGACGCT CGAAACAGGC ACTGAGCCTG AAACCGCGCC GGTGGAAAAT GAAACCCCAG CGGCGACCAC GACGGAAACC GAAACCACGG TCACGCCAAC CGAGCCTGCG ATTCCAGAAG AAGTCGTCCC CAGCCTGCCT GAGAGCGATG CCTTTGTGCA TCAAAAAGCG CTGGCGATCA TCAATAACAA CGTGGTCGGC TCCTCCTTAG TGAACCAAGA TTTGGCCCGT CAGTTTGTGG TGTTCGTGGA CAACTTGGCC CAAGGCGATC TCGCCCGCAA AGTCAGCCCA GTCAAAGGCC CAGAAAAGCT GTTCACTGTG TCTGAAATAA CGAGCAAAGT GTATTTAAAT CCAGAGAGTT ACCACAGATA TGACGCCTAC GCGACTGTGA TTGCCAGCAT GGATGAGCAA ACCTTAATGC ACACCTACAA ACAGCTCACG CCGCTGTTTG ACGAGGCCTT TGCCGAATTG GGTTACAGCA ATGCCAAGTT CAATGACAGA ATGCTGCAAG CCATTAAGAT CATGCTCGCA GCTCCTATCA TCGAAGAGCC TATTGAGCTG AGCTCAATCA GCGTGAACTA CCGCTTTGTG GATCCTAATC TAGAAGCCTT ACCGAGCGCG CAAAAACTGA TGATCCGCAT GGGGCCAGAA AACACCCGTA AAGTGAAAGC GGCGCTGCGT AAATTGGAAA ACCAACTCGC CCAGTAA
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Protein sequence | MQVNQDDRIT PQETSSSSNR FALIAIVLVV LLSAGGYYYY TKDDSPKLIP NAPIVLPEPP SSEPMTLETG TEPETAPVEN ETPAATTTET ETTVTPTEPA IPEEVVPSLP ESDAFVHQKA LAIINNNVVG SSLVNQDLAR QFVVFVDNLA QGDLARKVSP VKGPEKLFTV SEITSKVYLN PESYHRYDAY ATVIASMDEQ TLMHTYKQLT PLFDEAFAEL GYSNAKFNDR MLQAIKIMLA APIIEEPIEL SSISVNYRFV DPNLEALPSA QKLMIRMGPE NTRKVKAALR KLENQLAQ
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