Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0260 |
Symbol | |
ID | 4479168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 291652 |
End bp | 292185 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639724792 |
Product | hypothetical protein |
Protein accession | YP_867909 |
Protein GI | 117918717 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.454469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000127449 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTGCAT TAACCCTCAT CAGCTTATTG CTGCTCAGCC TGTTCGCCCA GGCAACAGTG TACAAATGGG TCGATAAGGA TGGAAAAGTC CATTATTCAG ATGAACCACA TCCCAATGCC GAGGTTGTTG AGTTAAAAGA GAAAACGCTC AATCAAATTG CACTCCCCCC CGTAAAAAAT GATGCGGATG ACTCGCAAGT GATCCAACAA ATCCAGTATC AAGTCGTCAT CACTTCCCCT ACGGAAGAGG AAACCGTGAG AGACAATAAC GGAGACTTTC AAGTCACCGC CACTGTCACC CCAGAGATCA AAAGCCAGTA TCTGATGGCA CTCAAACTCG ACGGTCAAAC GGTCGGTCAG CCTCAAGTGG GTGGCATCTT CCAACTTAAG AACATCGACC GAGGTGAACA TACCATTGTT GTCGATGCCA TGACTCAAAA CGGCAAAGTC TTTGCATCTA GCTCTCCACG AAAGATATTT CTTCATCAAG CGGCGATGAA TCCAGTCCCG AAAAAACAAC CAAAATCTAA TTAA
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Protein sequence | MRALTLISLL LLSLFAQATV YKWVDKDGKV HYSDEPHPNA EVVELKEKTL NQIALPPVKN DADDSQVIQQ IQYQVVITSP TEEETVRDNN GDFQVTATVT PEIKSQYLMA LKLDGQTVGQ PQVGGIFQLK NIDRGEHTIV VDAMTQNGKV FASSSPRKIF LHQAAMNPVP KKQPKSN
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