Gene Shewana3_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0120 
Symbol 
ID4477269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp135406 
End bp135855 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID639724640 
Producthypothetical protein 
Protein accessionYP_867770 
Protein GI117918578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00393548 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGCGAC AGGGATTGAT GAAAAAACAC ATTTTACGGT GCTTCGCGGT ACTGATGTTG 
CTGTTTGTTG GGCAAGTGAG TGCAGTGCCG ACGGATGATA TTGCCCAAAT GCTAAAAGGT
CAGGAAGATG CGTGGAACCG CGGCGATCTT GACGCTTACA TGCAGGGTTA TTGGAAGAGC
GAACAGCTTA GATTTGTCTC TAATGGAAAG TTTCGTTACG GCTGGGATGA AACCCTTGCC
GCCTACAAGA AAAACTATCC GAATAAAGAG GCGCTGGGTG AACTGAAGTT CACCATCAAA
GAAATCAAAA TGCTCAGTAA CTACGCCGCT ATGGTAGTTG GGCGTTGGGA TTTAAAGCGG
CAAAAGGATG CGCCCACGGG GGTATTTACC CTGCTGGTGG AAAAAATTGA TGACCGCTGG
GTGATCACTA TGGACCACAG TTCGGACTGA
 
Protein sequence
MLRQGLMKKH ILRCFAVLML LFVGQVSAVP TDDIAQMLKG QEDAWNRGDL DAYMQGYWKS 
EQLRFVSNGK FRYGWDETLA AYKKNYPNKE ALGELKFTIK EIKMLSNYAA MVVGRWDLKR
QKDAPTGVFT LLVEKIDDRW VITMDHSSD