Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3657 |
Symbol | |
ID | 4482368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4593578 |
End bp | 4594285 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639724412 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_867548 |
Protein GI | 117926931 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0664896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.80837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACCA TCACCCAGCG ACTGGAAACC ATTCAAGAAC ACATGGTGCA AGCCTGTCAA CGGGCGGGTC GTTCACCCCA CGAGGTGCAG CTTATGGCGG TCTCCAAACG TCAGTCCAGC AGCGCCGTGA GCGAAGCAAT CGAGGCCGGG CAGCTGCTGT TTGGGGAAAA CCGCGTGCAA GAGGCCAAGG AGAAACAGCC CACGGTGTCT ATGCCCGCTG GGGTGCAGCC CCAATGGCAT ATGATCGGCC CGCTGCAAAA AAATAAGATC AAATACATCG GTGAACTGTT CCACATGGTA CAAACGGTGG ATACCCTAAC CCTGGCCCAG GCCATCGGCG CACGCATGCA GGCCGAGCAA CGCCAAATGC CCATCCTATT ACAGGTCAAT GTGGGTGGAG AGGCGCAAAA AAATGGGATG ACCGCCGAGG CCTTGGAAGA GCAGGTGCGT CACATAGCCC AGATCCCAGG GGTGCGCATT CAGGGTTTAA TGACCGTGCC CCCCTATCTG GAAGATCCCC AGCAGGTGCG TCCCTATTTT CGGGCGCTCT ACACCCTGGC GAACCATGTG CAACAAATGC GTCTGCCAGG GGTTGCCATG GAGACCCTCT CCATGGGGAT GAGTCACGAT TTTCACGTGG CTATCGAAGA GGGGGCCACC ATGGTACGGG TAGGCAGCGC CCTGTTTGGG GAACGTCGCG TAGCCTAA
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Protein sequence | MHTITQRLET IQEHMVQACQ RAGRSPHEVQ LMAVSKRQSS SAVSEAIEAG QLLFGENRVQ EAKEKQPTVS MPAGVQPQWH MIGPLQKNKI KYIGELFHMV QTVDTLTLAQ AIGARMQAEQ RQMPILLQVN VGGEAQKNGM TAEALEEQVR HIAQIPGVRI QGLMTVPPYL EDPQQVRPYF RALYTLANHV QQMRLPGVAM ETLSMGMSHD FHVAIEEGAT MVRVGSALFG ERRVA
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