Gene Mmc1_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3282 
Symbol 
ID4482252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4098263 
End bp4098763 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content56% 
IMG OID639724033 
Productrubrerythrin 
Protein accessionYP_867178 
Protein GI117926561 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000199245 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCGAAAATTT ACAAGCCGCC TTTGCTGGCG AAAGCCAAGC CAACCGTAAA 
TATCTCGCTT TTGCCAAAAA GGCCGAACAA GATGGCTTTA GCCAAGTCGC TAAACTGTTC
CAAGCCGTGG CCGAAGCCGA AACCATCCAC GCCCACTCCC ACCTGCGCGT GCTTGATGGT
GTACATGACA CCGCCGCCAA CCTAGAAGCC GCCATGGCCG GTGAAGATTA TGAGTTCACC
ACCATGTACC CCGAGTTTAT CGCCGCCGCC GAAGCTGAAG GCAATAGCAA AGCGGTTAAA
TCTTTCAAAC ACGCCATGGC CGTGGAAAAG ATCCATCACC AGCTCTTTAT CCAAGCGCTC
GAAGCGGTGA AGGCCGGTCA AGATCTTGCT GAGGCAACCT TCCACATCTG CCCGGTCTGC
GGCCATACCG AAATGGGCCC CGCCCCCGAA AGCTGCCCCG TCTGCGGCGT CAAAGGGGAG
AAGTTTCTCG CCCTAGCCTA A
 
Protein sequence
MSTTENLQAA FAGESQANRK YLAFAKKAEQ DGFSQVAKLF QAVAEAETIH AHSHLRVLDG 
VHDTAANLEA AMAGEDYEFT TMYPEFIAAA EAEGNSKAVK SFKHAMAVEK IHHQLFIQAL
EAVKAGQDLA EATFHICPVC GHTEMGPAPE SCPVCGVKGE KFLALA