| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3162 |
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| Symbol | |
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| ID | 4483266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3937905 |
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| End bp | 3939074 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639723911 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_867058 |
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| Protein GI | 117926441 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000420577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000105041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAATTTT ATGCAAACTT TTGGGTTACA CTGCTCATCC TGCTGGCGTT AGCGGGGGGG
GGGCTCTATT GGCAGCTACA ACAGGCTGGT GCGCCCGTTG CCCCGGCCCC CTCGCCTAGT
GGGGAAAAAG CGCCGCCAGC CCTCGCGGTG TTACCGCTGG AGGCAAAAAC TATAAACATT
GCTGAAGAGG CCGCAGGGCG GGTGGTGGCC TATCAGAGTG CTGAAATTCG GCCCCAGGTG
AGTGGTATTC TTACCGAGCG CCTATTTACC GAAGGGGGAA CGGTCAAAGA GGGGCAGCCG
CTCTACCAAA TAGATCCCGC CGTGTTTCAG GCCGCCTACG CCAGTGCGCT GGCCGATTGG
AGAAAAGCCC AGGCAAACAA AGCGTTGCTA GAGGCAAAAA ATCAGCGCTA CGAAGCGTTG
GTTAAGCGTG ATGCCGTCAG TCAGCAACAG TATGACGATG TTCGCACCAA TCTTGCGTTG
GCCCAGGCCG AAATTGCGAT CACGCAGGCC GCCATTGCCC AAGCCCGGAT CAATTTAAAC
TATACCAAGG TGTTGGCACC CATCTCTGGC CGAATTGGCA AATCTCTGGT GAGCAAGGGG
GCGCTGGTAA CCGCCAACCA AGCCCAAGCA CTGGCCACCA TCACCCAATT GGACCCCCTG
TATGTGGATA TTAACCTACC CATAGAGAGC CTCATGCGCC TGCGCAAGCA GGCCGCCCGT
TTGCAGCAAG TGCCCGCGCG GCTCTATTTG GGTGATGATG CCCAAGCGTA TGCCCACGAG
GGTCAAGTGC AGTTTCATGA AATGGTGGTG GATGAGAGCA CTGGTACAGT ACCGCTACGG
GTTCAGTTTC CCAATCCCGA CACCATGTTG CTGCCCGGCC AGTTTGTGCG TGTACAGCTG
CTGCTCGCCT ATGCCCAGGC GTTATTGATT CCGCAAAAGT GTGCCGAGCG TAAGGCGGAT
GGCTCTCTGT CGGTTTGGGT GTTGGATGCA GAAAACAAAG CCCAGCCCAT GACCATCCAG
GTTGCCCAAG CGGTGGGGGA TGCGTGGCGT GTGGTGGAGG GCTTAAAACC AGGGGATCGC
CTAATCACCG AAGGGACCAT GAATCTTAAA GCCGGTGCGC CGGTGCAGCC GGTGTTGCCC
CAAACAACCG ATACCGGTAA TGGGGGCTGA
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| Protein sequence | MKFYANFWVT LLILLALAGG GLYWQLQQAG APVAPAPSPS GEKAPPALAV LPLEAKTINI
AEEAAGRVVA YQSAEIRPQV SGILTERLFT EGGTVKEGQP LYQIDPAVFQ AAYASALADW
RKAQANKALL EAKNQRYEAL VKRDAVSQQQ YDDVRTNLAL AQAEIAITQA AIAQARINLN
YTKVLAPISG RIGKSLVSKG ALVTANQAQA LATITQLDPL YVDINLPIES LMRLRKQAAR
LQQVPARLYL GDDAQAYAHE GQVQFHEMVV DESTGTVPLR VQFPNPDTML LPGQFVRVQL
LLAYAQALLI PQKCAERKAD GSLSVWVLDA ENKAQPMTIQ VAQAVGDAWR VVEGLKPGDR
LITEGTMNLK AGAPVQPVLP QTTDTGNGG
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