Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3079 |
Symbol | |
ID | 4483161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3850359 |
End bp | 3850571 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639723827 |
Product | cold-shock DNA-binding protein family protein |
Protein accession | YP_866976 |
Protein GI | 117926359 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000105073 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0700259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGC GCGAAACCGG TACTGTAAAA TGGTTCAACG ACACTAAAGG CTTTGGCTTC ATCGAGCGTG ACGGCGGTAA AGGCGATGCT TTCGTGCATC ACTCTGCCAT CAACGCCACT GGCTTCAAAT CCCTGGCCGA AGGTCAGAAA GTGGAGTTCA CCGTTGTTGC CGGTCAAAAA GGGGCTGCTT GTGAGAACGT TGTCGCTATC TAA
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Protein sequence | MAERETGTVK WFNDTKGFGF IERDGGKGDA FVHHSAINAT GFKSLAEGQK VEFTVVAGQK GAACENVVAI
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