| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2973 |
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| Symbol | |
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| ID | 4483491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3691713 |
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| End bp | 3693752 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639723720 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_866870 |
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| Protein GI | 117926253 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.439966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.101285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAC CAGCGATAGA CCGATCCGCA AAAAAGGTTA TTAGGTCTGC CAGCCAAATA
TTGGGCTGGC GGCTAAAGCC CCCTTTTACC CTGAAAAGCA TCATCCACCA CCACTATCTT
AGCTCGGCGC TGTTCCCTAT ATTAGCCATC GATCTGGTTT TGTTGGTGCT CTATTTTGGT
GTGACAGGCT ATCTATCCAA CCACAATGGC GCGGCATTGC GGCAAATTGC ACTGACCAAT
TTGCACGGAT TTATGCTGCA AGAGGCCGAA TATTTGAACC AGCGGCTCTC TGAAATTAGC
CGGACCGCGC GGATTTTGCA GGACCAACAG AGCCGTTTTT TCCAGATGAG CCCTTGGCAA
AACCTCACGC TGCCCAATGG CGAGCCCCGC TTTGCGGTAC ATGCCAATGG GGTCTTTTAT
AAGGAGGAGG ATAATGGTGG CAGTAGCCTC TACTATGCGG CCACCACCAA TATTGGGGAG
GTGGAACGGC GCAAGGCGCG CGCGACAGAG TGGTTGGACC CTATGCTTAA ACAGGTGGTG
GAGAGCCAAC CGCTGGTGGC TCAGGCTTAC CTGAATACTT TTGATAATAT GAACCGACTC
TACCCCTTTC TATCCGATGC CCCAGGCATG TTTGGGCCAG AGTTAAATGT GACAAGCTAT
AATTTTTACT ATTTGGCCGA TGCGCAGCAT AACCCCTCGC GTAATCCGGT ATGGACCACC
ACCTATCTGG ATCCTGCGGG CAAAGGTTGG ATGGTCTCCT GTGTCGTACC TATCTACAGT
GGCAATCTGC TGGAAGGGGT GACAGGGTTG GATGTGACGA TTCGGGATTT TGTCACTCAT
GTGCTGGCTT TGCCGTTACC TTGGTCCGGT AGTGCATTTT TGTTGGATGA GCAGGGTAGT
ATTCTTGCAA TGCCACCCAA GGTTGAGGTC ATTTTAGGGC TTAAAGAGCT TAAAGATCAC
GACTATAAAC AGACCGTGGA CCGGACCATG TTACGCCCTG CATCCTATAA TATCTTGAAA
CACGCCGATC CTATGGTGCA ACAGCAGTTT CACAAGTTGC TTGGTGAAGG GCAAGAGCAG
GGTGTATTGG TAAGCAAAGG TGAGCGGTAT TTGATGGCGC ACCGAAAAGT ACCATTGACA
GGCTGGCATT TGGTCACGTT GGTGGATGAG TCGGTGTTGC TGGCCTCCCA GGATGCCTTG
GCCAGCTTGA TGTTGCGCAT TGGGCTATGG GTTGGCACGG CTGTGGTGGT TTTTTATGGG
CTGTTTTTTA TCTATCTTAG CCGTAAATCC TTACGCTTGG CCGGGGTAAT CGCGCAGCCT
TTGCTGCATT TGGCGCAGCA GGCTAAGCAG GTCGAGGCTC AGCAAAGTGG TGTGACATTG
GCACCGGTTG GCGTGATGGA GGTGGACAGC CTAAGTGAAA GCTTTAATAG AATGGTGCAA
ACCGTGCAAC AGCGTACAGA AAAGCTTGAA AGTACGCTCA TTGAGTCGCA ACTTCATGAA
GAAAAAGCCA AACTTTATGC CAGTCAGGTC AGCACCGATA GCCTGACCGG ATTTTATACC
ACAAGCGAGA TTGCGGTTTT TGCCCAGCGT GAAATAGCCC GAAGTCGTCG TTATTATCAA
CCTTTCAGCT TGTTGTTGGT TAAGGGCGTA CGGTCTGACT TAAGCCAAGA ACCACACGCT
TATGGGGCGA TGGCTTGGCT GAAAAATCTC GCTGAAGCAC TGGACGAACA GTTGCGGGAG
ATTGATCTGG TTGGGCATTG GGGGGATCGC TTTTTGTTGG TGTTATTGCC CTCTACTGAA
CTTGGGCAGG CCGCACAGTT AGCCAAGCGT TTGCAGGATG ATTTAAGCCA ACGGATGATG
GAGGATCAAG AGGCCTTCCA ACTGAACATT GTTGTGGGTC AGTTGGGAGA CGAAACCGAG
CTGGAACCCT TGTTGCAAAA GTTTCTGGAT GGGCTGGCCA GTGATGCAAA CGCACCTGAG
CGACGGACTG TGGTGCTACA GATGGGTAGA GCGGTGCCGT TATCAACATA TTTAAAGTAG
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| Protein sequence | MEKPAIDRSA KKVIRSASQI LGWRLKPPFT LKSIIHHHYL SSALFPILAI DLVLLVLYFG
VTGYLSNHNG AALRQIALTN LHGFMLQEAE YLNQRLSEIS RTARILQDQQ SRFFQMSPWQ
NLTLPNGEPR FAVHANGVFY KEEDNGGSSL YYAATTNIGE VERRKARATE WLDPMLKQVV
ESQPLVAQAY LNTFDNMNRL YPFLSDAPGM FGPELNVTSY NFYYLADAQH NPSRNPVWTT
TYLDPAGKGW MVSCVVPIYS GNLLEGVTGL DVTIRDFVTH VLALPLPWSG SAFLLDEQGS
ILAMPPKVEV ILGLKELKDH DYKQTVDRTM LRPASYNILK HADPMVQQQF HKLLGEGQEQ
GVLVSKGERY LMAHRKVPLT GWHLVTLVDE SVLLASQDAL ASLMLRIGLW VGTAVVVFYG
LFFIYLSRKS LRLAGVIAQP LLHLAQQAKQ VEAQQSGVTL APVGVMEVDS LSESFNRMVQ
TVQQRTEKLE STLIESQLHE EKAKLYASQV STDSLTGFYT TSEIAVFAQR EIARSRRYYQ
PFSLLLVKGV RSDLSQEPHA YGAMAWLKNL AEALDEQLRE IDLVGHWGDR FLLVLLPSTE
LGQAAQLAKR LQDDLSQRMM EDQEAFQLNI VVGQLGDETE LEPLLQKFLD GLASDANAPE
RRTVVLQMGR AVPLSTYLK
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