| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2250 |
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| Symbol | |
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| ID | 4481594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2875467 |
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| End bp | 2876351 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639722999 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_866157 |
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| Protein GI | 117925540 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000133165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTACG ATGAATGTCG AAATTGCCGG GATACGGTTA CGTGGTACTC CATTGTTTCT
AACCTGATCC TGGTGGTTAT TAAGGGAGTT TTGGGTGTTA TCTCAGGCTG TCAAGCGCTG
GTGGCGGATG CCTTTCACTC CTCTGCGGAT GTCATGGCCT CTACCGTAAC GTTGGCCAGC
TTGAAAATTT CCGAGCGTCC AGCCGATGAC GACCACCATT ACGGGCACGG TAAGGTTCAG
TTTATTTCAT CGTCCATCGT GGGGTTGATT CTGATTACGG GGGCGATTTT CATTCTGATT
GACGCCATCA AGACCATTGT GACGGGCGAT TATGACGCTC CTAATCGCAT TGCCATTTTG
GGAGCTGCCA TTTCGGTGAT CTCCAATGAG CTGATGTTTC GCTATCAGAG CTGCGTGGGT
AAGCAAAACA ACAGTCCTGC CATTATGGCC AATGCCTGGG ATAATCGCTC CGATGCTTTT
TCATCCATCG CTGTGATGAT TGGGGTTGCT TTTGCGACAT TTGGTTTTCC TGTCGCGGAT
CCCTTGGCGG CATTGGGGGT TTCTGTCCTG GTGATTCGTA TCGGTATCGA ATTAAATCTG
GAAGCCATAG ATGGTCTGAT GGATGCCTCA CCAGAGATGG AGGAGTTGGA AGATATTTAT
AAAATTGTCA AAGATGTCTC CAGCGTACAT GGCATCAACT ACATGCGAGC ACGTACCATG
GGGGATAACC TGCACGTGGA ACTCAATGTG GAGGTTGCCG AAGCGTTAAA GGTGTATGAA
GGGGATTTGA TTGTAGACCT GTTAAAGCGG CGTATCTTCC AAGAGGTCAA ACACATTGGC
GAGTTGCAGA TATTTTTGAC ACCGCTGCGT ACGGAGTCCC GTTGA
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| Protein sequence | MKYDECRNCR DTVTWYSIVS NLILVVIKGV LGVISGCQAL VADAFHSSAD VMASTVTLAS
LKISERPADD DHHYGHGKVQ FISSSIVGLI LITGAIFILI DAIKTIVTGD YDAPNRIAIL
GAAISVISNE LMFRYQSCVG KQNNSPAIMA NAWDNRSDAF SSIAVMIGVA FATFGFPVAD
PLAALGVSVL VIRIGIELNL EAIDGLMDAS PEMEELEDIY KIVKDVSSVH GINYMRARTM
GDNLHVELNV EVAEALKVYE GDLIVDLLKR RIFQEVKHIG ELQIFLTPLR TESR
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