| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0867 |
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| Symbol | |
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| ID | 4480416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1064530 |
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| End bp | 1065858 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639721615 |
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| Product | protein translocase subunit secY/sec61 alpha |
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| Protein accession | YP_864792 |
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| Protein GI | 117924175 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000152006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00837403 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGCGA CTCCCAACGA AGCCCCTTTG GCTGGTCTGG GTAATCTGGG CAAAATCCCT
GAGTTGCGTA AAAGGATTTT GTTTACGCTG GGTATGCTCA TTGTGTATCG CATTGGTGCG
CATGTACCCA CGCCGGGTAT TGATCCCCAG GCCTTGGCAA CCTTCTTTGA GCAACAGCAG
GGTTCTCTGC TTGGTATGTT TAACATGTTC TCCGGGGGCG CACTGTCACG ATTGACGGTG
TTTGCCCTGG GGATCATGCC TTACATCTCG GCTTCGATTA TCATTCAGTT GATGACAGCC
GTGTTTCCCA AGCTAGAGGC GATTAAAAAA GAGGGTGAAG CGGGACGTCG TAAGATAACC
CAATACACCC GTTACGGTAC CATTGTGCTG GCTTTGTTCC AGGGTTTTGG TATCGCGTAT
GGTTTAGAAT CCATGAAGGC TGGTGGGTTA AATGTTGTTA TTGAACCGGG TATGGAATTC
CGGCTCATGA CGGTATTGAC ACTGACCGCA GGTACAGCCT TTCTTATGTG GGTGGGTGAA
CAGATTACGG ATCGAGGTAT TGGCAACGGG ATCTCCCTGA TCATCTTCTC GGGGATCGTC
GCCAACCTAC CGGTAGCCTT GTTCAATACT TTGCAGTTGG CTCGAACGGG TGATCTGGCA
CCGCTGTTGG TGTTGTTTTT GATTGCTATG GCCATTGTGG TAACCGCTTT CATTATCTTT
ATGGAGCGGG CACAAAGACG GATTACCATA CAGTACGCCA AACGTCAGGT TAGTGGGCGG
CGGATGGTGG GTGGTGAAAG TTCGCACCTT CCTTTGAAGG TGAATACGGC GGGGGTTATT
CCGCCCATTT TTGCCAGCTC CATTATTCTG TTTCCGGTGA CCATCGCGAA TTTCATGCCT
TGGGAAGGTT TCAAGGAGTT TGCCGCGATG TTTTCACCTG GGCAGCTTGG CTATATGGTG
TTTTATTCGG CAGCGATTCT GTTTTTCTGT TTTTTCTATA CAGCGATTGT TTTCAATCCT
GAAGAGACAG CAGATAACCT GCGCAAGTAT GGCGGTTTTA TCCCTGGAAT ACGCCCTGGT
AAGCGTACTT CGGATTATCT GGATAAAATT TTAAGTCGCT TAACGTTGGT CGGTGCGATC
TATGTTACGG CGGTTTGTCT CTTGCCTGAG ATATTGATTG CCCAGTATAA CGTTCCGTTT
TACTTTGGCG GCACCTCCAT GCTGATCGTT GTGGGTGTAA CCATGGATAC CACGGCTCAG
ATACAATCCT TTTTAATCAG CCGCCAGTAT GAGGGGTTGA TGAAGAAGGC GAAGATCAAA
GGGCGTTAA
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| Protein sequence | MAATPNEAPL AGLGNLGKIP ELRKRILFTL GMLIVYRIGA HVPTPGIDPQ ALATFFEQQQ
GSLLGMFNMF SGGALSRLTV FALGIMPYIS ASIIIQLMTA VFPKLEAIKK EGEAGRRKIT
QYTRYGTIVL ALFQGFGIAY GLESMKAGGL NVVIEPGMEF RLMTVLTLTA GTAFLMWVGE
QITDRGIGNG ISLIIFSGIV ANLPVALFNT LQLARTGDLA PLLVLFLIAM AIVVTAFIIF
MERAQRRITI QYAKRQVSGR RMVGGESSHL PLKVNTAGVI PPIFASSIIL FPVTIANFMP
WEGFKEFAAM FSPGQLGYMV FYSAAILFFC FFYTAIVFNP EETADNLRKY GGFIPGIRPG
KRTSDYLDKI LSRLTLVGAI YVTAVCLLPE ILIAQYNVPF YFGGTSMLIV VGVTMDTTAQ
IQSFLISRQY EGLMKKAKIK GR
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