Gene Mmc1_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0866 
Symbol 
ID4480415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1064023 
End bp1064496 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content54% 
IMG OID639721614 
Product50S ribosomal protein L15P 
Protein accessionYP_864791 
Protein GI117924174 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00380263 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00669218 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTGA ACGAAATCCC CGCCGTACCT GGCAACCAAC AGAGCAGAAA CCGTGTGGGT 
CGCGGCCCAG GTAGCGGTAA CGGCAAGACT GCGGGTCGTG GTCACAAGGG TCAAAAGGCC
CGCAGTGGTG GTTTCCACAA GAGCGGCTTT GAGGGCGGTC AGATGCCTTT GCAGCGTCGC
TTGCCTAAAC GCGGTTTTAA AAACTTTACT CGGAAAGAGT ACACCATTGT ACAGGTGGAA
GATCTGGAGA AGTTTTTTGA TGCCGGTAGC GAAGTGAATG CCGAGGCCCT GAACGATTTG
GGTCTGTTGG GTAAAAAGCA GAAAAGCGGC ATCAAATTGC TAGCCAATGG CGATATCACC
AAGGCGATCA CAGTTTATGT GGACAAAGCC TCTGCGGCGG CTGTCGCTAA GATGGAAGCT
GCGGGTGGTA AGGTTGTGCT GGCGGTAGTG GCGGACCCTG AAGGGGACGC TTAA
 
Protein sequence
MKLNEIPAVP GNQQSRNRVG RGPGSGNGKT AGRGHKGQKA RSGGFHKSGF EGGQMPLQRR 
LPKRGFKNFT RKEYTIVQVE DLEKFFDAGS EVNAEALNDL GLLGKKQKSG IKLLANGDIT
KAITVYVDKA SAAAVAKMEA AGGKVVLAVV ADPEGDA