| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0863 |
|---|
| Symbol | |
|---|
| ID | 4480412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1062898 |
|---|
| End bp | 1063263 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639721611 |
|---|
| Product | 50S ribosomal protein L18P |
|---|
| Protein accession | YP_864788 |
|---|
| Protein GI | 117924171 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00546241 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0054851 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGG ATCGGAATCA AGCAAGAAAG GCCCGTAGCG CACGTGTGCG CTCGAGGATC
AAGAAGGTAC AGGGCGAACG TCCTCGTCTT TCGATCTTTC GTAGCGCTCG TCATATCTAC
GCTCAGATCA TTGATGATAA ACAGGGTCGT ACCCTGGTTT CTGCCTCTAC GGTAGAAAAA
GATCTGCGTG AGGATATGAA AAACGGCGGT AATGCGGATG CGGCAGCCTT TATTGGTAAA
CGTATCGCTG AAAAAGCGAA AGAGCAGAAC ATCACCGAGG TGGTGTTCGA CCGCGGTGGC
TTCCTCTATC ACGGCCGCAC CAAGGCCCTG GCTGAAGCAG CCCGTGAAGC CGGGTTGAAC
TTCTAA
|
|---|
| Protein sequence | MAKDRNQARK ARSARVRSRI KKVQGERPRL SIFRSARHIY AQIIDDKQGR TLVSASTVEK
DLREDMKNGG NADAAAFIGK RIAEKAKEQN ITEVVFDRGG FLYHGRTKAL AEAAREAGLN
F
|
|---|
| |