Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0010 |
Symbol | |
ID | 4480637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 10733 |
End bp | 11533 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639720756 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_863945 |
Protein GI | 117923328 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCCTG CCGCCATGAT GGATTTTTTT GGCTTCACCA TTGGCGAGGT GGAGCGCATG GTGCTGATCA TGTCCCGTCT TTCGGGGCTC TTTTTGGCCG CCCCCTTTTT CTCCCGCAAT GTTGGGCCCA AACGTATTCG GGTGATACTG TTATTATGGA TCACCATCGT GATCTACCCC ATCGTTCCAC CCTGGCCGGG GGAGGGCAAT GGCGAGGTGA TACGCATGGT CTTTACGGGC GTGGTGGAGT TTAGCATGGG CATCATGATC GGGATGATCG CCCATTGGGT ACTGGTGTCG GTACAGATTG CGGGTACCAT GATCGGCTTT GAGATGGGTC TCTCCATGGC AATGGTGATG GACCCTACCT CGGGCGTGCA GGAAGGCGTT TTAGCTAACC TTTTATATCT TTTTGGGTTA ATGCTTTTTT TACTGCTCAA TGGCCACCAT TGGCTATTAG AAGGGCTGGC CCGCTCGTTT GTGAGCATGC CATTGGGCAG CCCTTTGCCC CATGGTGAAC CCATGATTAC CATTGTATTA CAGGGTATTG TACACATGTT TGAGCTGGCG CTGCTGCTGG CAGCCCCGGT GGTTGCGGCC GCCAAGCTGC TCTATTTGGG CATGGGTTTG ATCAACCGTG CTTCACCGCA GATCCAGGTC TTTTTTCTGG CCATGCCGGT GGCACAGTTG ATGGGATTTT TAATTATGGG ACTCACTCTT TCCATTTTCG GGCAGCGTTT AACCCGCGAG ATGGAGCTGT TTATCAACCT TGCCTTCCGG GTGGTTGGGC TTACGCCCTA G
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Protein sequence | MDPAAMMDFF GFTIGEVERM VLIMSRLSGL FLAAPFFSRN VGPKRIRVIL LLWITIVIYP IVPPWPGEGN GEVIRMVFTG VVEFSMGIMI GMIAHWVLVS VQIAGTMIGF EMGLSMAMVM DPTSGVQEGV LANLLYLFGL MLFLLLNGHH WLLEGLARSF VSMPLGSPLP HGEPMITIVL QGIVHMFELA LLLAAPVVAA AKLLYLGMGL INRASPQIQV FFLAMPVAQL MGFLIMGLTL SIFGQRLTRE MELFINLAFR VVGLTP
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