Gene Shewana3_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4221 
Symbol 
ID4475980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp93556 
End bp94818 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content44% 
IMG OID639720579 
Producthypothetical protein 
Protein accessionYP_863737 
Protein GI117676161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.723086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAT TTGATTTTGA TTTAGATGCG TTAAATTCTG CTATGAACGC ATTTTTTGAC 
CCTGCCAGCG TGAGCACGGT TACCATCACC TGCCAGCAAA CCTCAAGCAT CATCCCTGCA
AGCCTGACGC ATTTAGTCAA GCCTGGTTAT GTGGACGGCA AACCACAATT CTTATCTGAC
ACCGGTGAAC TTATCGAAGG TGTTTACTCA GACATTCCAA ACGATGTGTA TCACTCATTA
GATGCCATTA GCTCAAGTCA GGTTAAGTGC TATGCAGATA GCCCAATGAA ATACGAACAA
GCGTATATCA ACGGTAAAGG TAAACAGTTC AGCGCCAAAT CCCGCGAGTC CGGTGTTTTA
AGCCACGAAT TAACACTAGA GGGAGCCGAT GTATTTAATG CTCGCAGATT TGCCCTGCTC
GACTCAGAGC AATTCCCAGA TGATCCAAAG TCATTAACCG AGCTTAAAGA TGCCTGCACA
GCCAACAAAC TAACAACCAG CGGCACCATT GCTGAATTAA TCAAACGCCT TGAGCAAGCC
AACGCTCCGC AAAAACCGTT TGAGTCACGT CAATTGGAGT GGATCAAAGC GAACATTGGT
GACGAGTGTT TTGCGTTATG TGATACAGAA CTACAGTCAG CGGTGACCTG TGCAGCAATC
ATTAAATTAC TTCAGGATAA TCAACATATC GCGATGAAGG CGCTTAAGCT GCCAGTGTCA
AAGGAGATGT TTGATAGCGT TATAGGACTC AATCAAGCCA TTGAACGCAA CGCTCACGCG
AACAAATTTT TAAATCGTAA AAACGGTATG GCGGAGGTCG CATTCTTTAC AAGAGATCCT
GAGACCGGAT TGATGCTTAA GTGCAAAGTG GATTGGTTAA CAGCCGTTAA AAATTTCATT
GTTCCTTGCG ATTTGAAAAC CACGCGCAGT GCTAACCCAG CGTTAGCGGC CTACCAGTTC
GCAGACTTAC GTTACGATTT GCAAGCTGTG TTTTACTTAA AAGTGATTAA GCCACATTTG
AAAGAAACCG AGTATGCAGA GCGTCTATTC CCACTCATCA CCGTTGAAAC GGGTGATTGT
GCAATTTGTG AAGTGTTTGA GCTTCACGAT GATGATTGGG TTATCGCTGA GCAAGATCTG
CCAATCATTC TTCAGAATAT GAAAAATAGC ATTAAGAAAA ACGAGTACCG AGGCTACACC
GAACAAGGTA AGTCTGTTAT CAAATTGGCA AGACGCAAAT CTTCTCTGGC TGCAACTCGA
TAG
 
Protein sequence
MSSFDFDLDA LNSAMNAFFD PASVSTVTIT CQQTSSIIPA SLTHLVKPGY VDGKPQFLSD 
TGELIEGVYS DIPNDVYHSL DAISSSQVKC YADSPMKYEQ AYINGKGKQF SAKSRESGVL
SHELTLEGAD VFNARRFALL DSEQFPDDPK SLTELKDACT ANKLTTSGTI AELIKRLEQA
NAPQKPFESR QLEWIKANIG DECFALCDTE LQSAVTCAAI IKLLQDNQHI AMKALKLPVS
KEMFDSVIGL NQAIERNAHA NKFLNRKNGM AEVAFFTRDP ETGLMLKCKV DWLTAVKNFI
VPCDLKTTRS ANPALAAYQF ADLRYDLQAV FYLKVIKPHL KETEYAERLF PLITVETGDC
AICEVFELHD DDWVIAEQDL PIILQNMKNS IKKNEYRGYT EQGKSVIKLA RRKSSLAATR