10 homologs were found in PanDaTox collection
for query gene Shewana3_4221 on replicon NC_008573
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008573  Shewana3_4221  hypothetical protein  100 
 
 
420 aa  873    Shewanella sp. ANA-3  Bacteria  normal  normal  0.723086 
 
 
-
 
NC_010084  Bmul_1850  exonuclease VIII, 5' -> 3' specific dsDNA exonuclease  31 
 
 
270 aa  51.6  0.00003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0122914  hitchhiker  0.0000001977 
 
 
-
 
NC_011205  SeD_A1383  exonuclease VIII  25.32 
 
 
896 aa  47.4  0.0005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.00000000000000167765 
 
 
-
 
NC_011080  SNSL254_A1046  gifsy-1 prophage RecE  22.61 
 
 
961 aa  44.7  0.003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.74306  decreased coverage  0.00000020097 
 
 
-
 
NC_012892  B21_01337  hypothetical protein  24.03 
 
 
276 aa  44.3  0.004  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2281  hypothetical protein  32.65 
 
 
282 aa  44.3  0.004  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.242274 
 
 
-
 
NC_011094  SeSA_A2289  gifsy-1 prophage RecE  22.61 
 
 
975 aa  43.9  0.005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.164176 
 
 
-
 
CP001637  EcDH1_2294  exodeoxyribonuclease VIII  24.03 
 
 
866 aa  43.9  0.006  Escherichia coli DH1  Bacteria  hitchhiker  0.000104441  n/a   
 
 
-
 
NC_007948  Bpro_1536  hypothetical protein  33.68 
 
 
315 aa  43.5  0.006  Polaromonas sp. JS666  Bacteria  normal  0.0110516  normal 
 
 
-
 
NC_011080  SNSL254_A2842  gifsy-1 prophage RecE  22.61 
 
 
975 aa  43.9  0.006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.377327  normal  0.0706472 
 
 
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