Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3941 |
Symbol | |
ID | 4457726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4799624 |
End bp | 4800715 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639704714 |
Product | permease |
Protein accession | YP_848045 |
Protein GI | 116751358 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.371691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCGCCG GGCTCCTCAA CAGGGTCTTC ACGGCGTTTT TCGATATCCT CAACGGCGCA TCGGTCTGGC TGGTGTTGAG TTTTGCCCTT GCGGGCACTC TGCACAGTTT TCTGCGACCG GAGAAGCTCC AGAGAATGCT GGGAAACGGG AGGCTTTCCT CCATCATGCG GGGTACGGTT TCAGGAATGT TGCTCCCCAT TTGCAGTTGC GGGGTCATTC CGCTGGGACT CGGCCTCTAC TATTCCGGCG CGTGGCTCGG CCCCACGCTG GCTTTCATGA CGGCCACCCC CATCATCAAT CCTGCGGCGG TACTCCTGGC CTACGGACTT TTGGGGCCTC AGATCGCCAC GATCTATCTC GTAAGCGGCT TTGTCGTCCC GATGATCGTG GGCATGGCGG GGAACCGTTT TGCCGGCCCC GAACTGCGGG CGCCCGGTAT CGAGGAGTTC GTAAACGTGC CGGCGATGGA GCACGGCGAC GGCATTGGGG TGGGCCGCAA ATTCATTTCC GGCCTTCATT GGGGTTTCAT GGAACTTGGG GTCATGGTGA GCAGGTACAT TGTAATGGGA GTCTTCCTGG CGGGCGTGAT CATCGCCGTC ATTCCCAGAA CCACGATCCA GGAATACCTC GGAAACCCCG GCATGATCTC CCTTCTCGGT ATCGCGGTCC TGGGGGCCGT CATGTACGTG TGCGCCGTCG GGCACATCCC TTTTGTGGCC GCATTGGTGG CGAGCGGCGC CGCGCCGGGG ATTGCCGTCA CTTTCCTCAT GACGGGCGCA GCGACCAATC TTCCCGAGCT CATCAGCATT TACAGGACGA TCGGCAAACG CGCGGTGGCC ATCTACACCC TGACAATGGT CGCCGCTTCC ATGCTGATCG GCTACCTGAC CAACGTGCTG CTGTTGAGGG ACTTTGTGCC CTTTTTCGGG AGCGATCACG CCACGGGAAC GGTCGGCATG GCGAAGAGGC TCATCGTGGC CGCTCCAAAA CCGCTGGAAT ACCTCTGTTC GGGGATCATT CTGGCTCTTG CTGTCCATGC GTGTCTGCCT CGAATCCGGC AACTCCTCAC CGGCGCGGAA TGCTCCCGAT GA
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Protein sequence | MIAGLLNRVF TAFFDILNGA SVWLVLSFAL AGTLHSFLRP EKLQRMLGNG RLSSIMRGTV SGMLLPICSC GVIPLGLGLY YSGAWLGPTL AFMTATPIIN PAAVLLAYGL LGPQIATIYL VSGFVVPMIV GMAGNRFAGP ELRAPGIEEF VNVPAMEHGD GIGVGRKFIS GLHWGFMELG VMVSRYIVMG VFLAGVIIAV IPRTTIQEYL GNPGMISLLG IAVLGAVMYV CAVGHIPFVA ALVASGAAPG IAVTFLMTGA ATNLPELISI YRTIGKRAVA IYTLTMVAAS MLIGYLTNVL LLRDFVPFFG SDHATGTVGM AKRLIVAAPK PLEYLCSGII LALAVHACLP RIRQLLTGAE CSR
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