Gene Sfum_3733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3733 
Symbol 
ID4457933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4554943 
End bp4556082 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content53% 
IMG OID639704506 
Productparallel beta-helix repeat-containing protein 
Protein accessionYP_847838 
Protein GI116751151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00966756 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT CAAGAATGGT GCTCATTGGA GCAGTGGTCA GCCTGGCAAT CCTTACGGCC 
TCCGTCGCTC ACGCGGCCGC GCCCGGGGTC CCTGCCCCTG TCTCCCCGTC AGGTAAGGTG
GCCGGCTCCA CCATCACCTT TCTCTGGAAA GCGGTTACGG GTGCGACCAA GTACCAACTG
CAGGTGAAGT CCGGCTCCGT CATCAAGCTC AACACGATCT TCACCGCGGC CCAGGCGAAC
TGCTCGGATG GAACCGGAAC CTGCTCCGCC CAAGCGACTT TTGGAGGCAC AGCCGCGGCC
CTGACCTGGA ACCTTCGGGC AGGCAACACG GCGGGCTTCA GTGCATGGAG CGCCGCCAAG
AACCTTGTCA TGACCGATGA GATGAGAACC CCCATCTCGT CTCTTCCCTA TACCATCAGC
TCTCCCGGCT CCTATTTTGT CACGGGAAAC CTCACCTCAA CGGGCACCGG GATCACCGTG
AATGCAAACG ATGCCACCAT CGACCTGGGC GGCTATGTTC TTACCGGGCC CGGCAGCGGG
GACAACCACG GCGTTCATAT GGTCGGCAGG AAAAATGTGG AGATAAGGAA TGGGACGATC
AAAGGCTTCG GAACGAATGG AATTTATGAA GCGAACGGCG GCTACTCCGA CCCCGGCCAC
AGGGTCATCG GGGTCCGGGT GATTGAAAAC GGTTCCAGCG GCATCTTTCT TGTCGGTAAC
CAGCACTTCA TCGAAAACTG CACTGCCATC AACAATGCTC AATATGGTAT CTATGTTGAT
TACTACTCCA TCATTAGAGA GTGCACCTGT ACAGGAAATC AAAATGGTAT CTATTGCTAC
TCAGGATCAA CAATTTCAGA CAATATTGCT TCACAAAATA GTGAAAATGG AATACGTGCA
ATTGATGGGA ATAGTGTAAT CAACAACATA GCAATGGAAA ACGGCAACCA TGGAATAATG
GCAGATGGAT ACAATACGAT TAAAAACAAC ACGACTTCCT GGAACAAGTA TAGTGGAATC
CAGCTTGGCA CCTACAGTGT GCTGGATGGA AACACCTCTT ACCTCAACAA CCAATCCGGA
GGTGCCTATC CAAACATAAG CGATTGCGTG ACTTGTGCAT CGGGGATCAA CGTGAAGTAG
 
Protein sequence
MKTSRMVLIG AVVSLAILTA SVAHAAAPGV PAPVSPSGKV AGSTITFLWK AVTGATKYQL 
QVKSGSVIKL NTIFTAAQAN CSDGTGTCSA QATFGGTAAA LTWNLRAGNT AGFSAWSAAK
NLVMTDEMRT PISSLPYTIS SPGSYFVTGN LTSTGTGITV NANDATIDLG GYVLTGPGSG
DNHGVHMVGR KNVEIRNGTI KGFGTNGIYE ANGGYSDPGH RVIGVRVIEN GSSGIFLVGN
QHFIENCTAI NNAQYGIYVD YYSIIRECTC TGNQNGIYCY SGSTISDNIA SQNSENGIRA
IDGNSVINNI AMENGNHGIM ADGYNTIKNN TTSWNKYSGI QLGTYSVLDG NTSYLNNQSG
GAYPNISDCV TCASGINVK