Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2859 |
Symbol | |
ID | 4458825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3527110 |
End bp | 3529182 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639703633 |
Product | UvrD/REP helicase |
Protein accession | YP_846971 |
Protein GI | 116750284 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCC GCATTGCCGA CACATTCACC GACAGCCTCA GCAGGCTTAC GGGGCACGAA CAGAAGGCGG TGAAGACCAC GGCCTTCGAC CTGCAAATGA ACCTTGGCAA ACCTGGAATG CATTTCCACA AGCTGGACAA GGCGCGAGAC CCCAACTTCT GGTCGGTGCG GGTCAGCGGC GACATTCGAA TCATTGTGCA CAAGACGGAC GCGAGCCTGC TCCTGTGTTA CGTCGACCAC CATGACACCG CCTACGATTG GGCCGAGCGG CGCAAGTTGG AAACGCATCC CAAGACCGGC GCCGCACAAT TGGTTGAGGT CCGAGAGACG GTCAGGGAGA TCACGGTTTC CAAATACGTC GAAGTGGGGG AGAGGGATCA TGCCAAGCCA CCCCTGTTTG CCGACGTCCC CGAAGAAGAT CTATTGAGTT ACGGTGTGCC CATCGAGTGG TTGGATGATG TGCGCAAAGC CAATGAGGAT ACCGTGTTGG AGCTGGCCGA CCATCTTCCG AGCGAAGCGG CCGAGGCGCT GCTGGATCTG GCCACCGGGG TGCATCCGCA GATCACACAA CCTACAGCAC ACGGCAAGGA TCCGTTCGAC CACCCCGATG CACAGCGCCG GTTCCGCGTG ATGCATGACG TTGAAGCGCT GGAACGCGCC CTAGACTATG CCTGGGAGAA GTGGACGGTT TTTCTCCATC CCGCGCAACG TCAGCTGGTG GAGAGACAAT TCAGCGGCCC TGCCCGGGTC TCGGGCTCCG CAGGTACGGG AAAGACCATC GTTGCGCTCC ACCGGGCCGT TCATCTTGCC CGTATCCACC CCGATGCGCG GGTGCTGCTC ACGACGTTTT CCGAGACCCT GGCGAATGCA CTGCGCACTA AGCTCAGACG ATTGATCAGC AATGAACCGC GGATTGGCGA ACGCCTGGAA GTGCACGCCA TGGGCGCGAT AGGCAGGCGG CTTTATGAAT TGAACTTCGG CCGTCCCCGG ATCGCTTCCC GGGAAGCGAT CCGGCAGGCT CTCGACGAGG CTGCCGGGGC GGTCGACGGC CACAGGTTCA GCCGCCATTT CCTGATGATG GAATGGGCGC AGGTTGTGGA TGCCTGGCAA CTGAAAACTT GGGAAGCCTA TCGCGACGTC AGGCGGCTGG GTCGAAAGAC ACGCCTTCAA GAGAAGCAAC GTGCAGTGCT CTGGTCCATT TTCGACCACG TCTGGTCCAG CTTGGAGAAT CGGGGCATGG TGACCGAGTC TTATCTTTTC AGTCGCCTGG CCTCGCAGCT CGCCGAGACC GGACGGCCGC CGTTCGATTA TGTGGTCGTG GATGAGGCAC AAGATGTCGG AATATCTCAG CTCCGATTTC TCGCTGCTCT CACCGCCACG CACCCGCATC ACCTGTTCTT CGCAGGCGAC CTCGGCCAAC GGATTTTTCA GCAGCCATTC TCCTGGAAGG CTCTCGGCGT CGACATTCGT GGTCGATCCC ACACGCTTCG AATCAATTAC CGGACTTCAC ACCAGATCAG AATGCAGGCT GACCGCCTGC TTGCCCCGGA ATTATCCGAT GTTGACGGAA ATTCCGAAGA GCGACGCGGT ACAATCTCGA TTTTCAATGG GCCAAAACCC AAGCTCATGA TTCTCGACAC ACCGGATGAG GAAATCGAGG CTGTCGGAAG GTGGCTCTCC GGACTTATGG ACCAAGGATT GCGGCCTCAC GAAGTGGGAG TTTTCTTTCG TTCCGCTGCC GAACTGGATC GAGCCCGCGC GGCAGCCAAA GCCGCAGGAC TTCCGGTCAG GGTACTGGAC GATAGCGTGG ACTCGAGCAG TGGTTACGTC TCCATCAGCA CCATGCATCT TGCCAAAGGC CTGGAGTTTC GGGCAGTCGC CGTGATGGCC TGTGACGACG AGGTCATTCC TCTGCAGGAA CGGATCGAAG CGGTTTCGGA CGACTCCGAC CTGGACGAGG TATACAACAC CGAACGCCAC CTGCTCTATG TCGCCTGTAC CCGTGCAAGG GACCATCTGC TTGTAACCGG TGTCGACCCT GCTTCGGAGT TCCTCGATGA TCTGCGGATG TGA
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Protein sequence | MEFRIADTFT DSLSRLTGHE QKAVKTTAFD LQMNLGKPGM HFHKLDKARD PNFWSVRVSG DIRIIVHKTD ASLLLCYVDH HDTAYDWAER RKLETHPKTG AAQLVEVRET VREITVSKYV EVGERDHAKP PLFADVPEED LLSYGVPIEW LDDVRKANED TVLELADHLP SEAAEALLDL ATGVHPQITQ PTAHGKDPFD HPDAQRRFRV MHDVEALERA LDYAWEKWTV FLHPAQRQLV ERQFSGPARV SGSAGTGKTI VALHRAVHLA RIHPDARVLL TTFSETLANA LRTKLRRLIS NEPRIGERLE VHAMGAIGRR LYELNFGRPR IASREAIRQA LDEAAGAVDG HRFSRHFLMM EWAQVVDAWQ LKTWEAYRDV RRLGRKTRLQ EKQRAVLWSI FDHVWSSLEN RGMVTESYLF SRLASQLAET GRPPFDYVVV DEAQDVGISQ LRFLAALTAT HPHHLFFAGD LGQRIFQQPF SWKALGVDIR GRSHTLRINY RTSHQIRMQA DRLLAPELSD VDGNSEERRG TISIFNGPKP KLMILDTPDE EIEAVGRWLS GLMDQGLRPH EVGVFFRSAA ELDRARAAAK AAGLPVRVLD DSVDSSSGYV SISTMHLAKG LEFRAVAVMA CDDEVIPLQE RIEAVSDDSD LDEVYNTERH LLYVACTRAR DHLLVTGVDP ASEFLDDLRM
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