Gene Sfum_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2606 
Symbol 
ID4459080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3218478 
End bp3219335 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content65% 
IMG OID639703377 
ProductparB-like partition proteins 
Protein accessionYP_846719 
Protein GI116750032 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.860771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA AAAAGCGCGG CCTGGGCCGC GGGCTCAACG AACTCCTCTC CCCCGCGAAC 
TGGCTGAAAG GGACCGACAT TCAGCTTTTT TACTGTCCCA TCGACCGGCT CCAGCCGAAC
CCGTACCAGC CCCGGCAGAA CATCCGGGAC GGGGAACTGG ACGAACTGGT CGAGTCCGTG
CGATCCAAGG GCATCCTGCA GCCGATCCTG GTGACCCGGA CCGCGGACAG GGACCGCTAC
CAGATCATTG CCGGCGAGCG CCGCTGGAGG GCCGCGGGCC TGGCGGGGCT CGGCGAGGTG
CCGGTGCTGC TGCGCGAGGC CACTTCCTCG GAGGCCCTGG AGTTTGCCCT GATCGAGAAC
ATACAGCGCA AGGACCTCAA TTGCATCGAA GAGGCGCTTG CCATCCGGAA GCTCCAGGAG
GAATTCCATC TCACCCAGCA GGACATCGCC GACCGGGTGG GAAGGGACCG TTCCACGGTC
GCGAACCTGC TCAGAATCCT CCAGCTTCCC GGGGACATCC AGGAGAAGGT CCTCAACGAC
GCAATCACCA TGGGGCACGC CCGAGCGCTC TTGAGCCTCC CCGACGCGGA GGCGCAACGA
AGATTGTGCG GCCTGATCAT TTCGCGCGGC CTCTCCGTGC GGGAGACGGA GCAGTTGGCT
GCCCGGGGCC AGGCCCCGCC TCCTCCGAAG GAAGCCGAAG ACCCCGGCCT TGCGGGGCTG
AGCAGGGCAC TCCAGGACCG TCTGGGCGTC AAGGTCCGGC TGAAACGGAA AGGAGAGCGC
GGCAGCATCA CCCTGTCGTT CCGTTCGGAG CAAGAGTTTC AGGCACTGCT CGATCGCCTG
GGACTGAACT CACAGTGA
 
Protein sequence
MAEKKRGLGR GLNELLSPAN WLKGTDIQLF YCPIDRLQPN PYQPRQNIRD GELDELVESV 
RSKGILQPIL VTRTADRDRY QIIAGERRWR AAGLAGLGEV PVLLREATSS EALEFALIEN
IQRKDLNCIE EALAIRKLQE EFHLTQQDIA DRVGRDRSTV ANLLRILQLP GDIQEKVLND
AITMGHARAL LSLPDAEAQR RLCGLIISRG LSVRETEQLA ARGQAPPPPK EAEDPGLAGL
SRALQDRLGV KVRLKRKGER GSITLSFRSE QEFQALLDRL GLNSQ