Gene Sfum_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2588 
Symbol 
ID4459113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3201450 
End bp3202565 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content58% 
IMG OID639703359 
Productrod shape-determining protein RodA 
Protein accessionYP_846701 
Protein GI116750014 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA
[TIGR02614] cell division protein FtsW 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0958791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACA GACGTCTGAT TGAAAACTTC GACTGGTCGA TCATCTGGGT GTTGCTGGGG 
ATCATCTGCA TCGGCCTGCT GAGCGTTTAC AGCGCACTCT ACCCGCAAAT CCGGGCCAAC
CCCACCCACA ACCTGTTCAT CAAGCAGATC ATGTGGCTGT CGCTCGGGTT CGGGGTCATG
TTCTTCACGC TCTTCCTGGA TTACCAGAAA CTGAAAGCGG TGAGCTTCTG GCTCTACCTC
GCAACGGTGG TGCTGCTTGC GGCCGTCCTG GTGGTGGGCA AGGAAGTCAA CGGGTCGAAG
CGCTGGCTGG AACTGGCCGG ATTCCAGTTC CAGCCGTCGG AGCTCATGAA GATCGTGATC
GTCATCCAGC TGGCCAGCTA CTTCTCCACC CAGGAGATGA CGTCGTATCC GCCACTGAAG
AAGCTCCTGA CGCCCTTGGC GTTTGTCGCC GCCCCGGTGC TGCTGATCCT TGCGGAACCC
GATCTCGGCA CGGCCATCTG CATCCTGGCC ATTTCCGGCA CGGTCATCTT CTTCATGGGG
ATTCGCTGGA AGTATATCCT GGCCATGATG ATCGGCGTGA TTCCGCTGCT GATGCCCATC
TGGATGACCG TTTTGAAACC CTATCAGAAG CGGCGGATCG AAATTCTGCT TCGGCCGGAC
CTCGATCCGC TGGGGGCAGG CTATCACATT CGACAGTCGA AAATCGCCAT CGGGTCGGGG
ATGCTCTGGG GAAAGGGGTT TCTGAACGGA ACCCAGAACA AGCTGCATTT TCTTCCGGAG
AAACATACGG ACTTCATTTT TTCGGTCTGG GCCGAGGAAT GGGGATTCGT GGGGTGCCTT
GTTCTGTTGG TGCTGTTCGG GCTCCTGGTA TTCCTGTCGC TGCGCGTGGC GCGCAGGTCC
AAGGACCGCT ACGGAGCCCT GCTGGTGGTG GGAATGACCG CGCTCATTCT CTGGCAGGCG
CTCATCAATA TCGGCATGGT CATCGGGCTT CTCCCCGTGG TTGGAATCAC GCTTCCCTTC
GTCAGTTACG GAGGGTCCTC CCTCATCACT CTGTGCTTCG CCATAGGCAT CATCGAGAGC
GTCAGCATGC GCCGTTACGT GTTTCAAACC CGTTGA
 
Protein sequence
MMDRRLIENF DWSIIWVLLG IICIGLLSVY SALYPQIRAN PTHNLFIKQI MWLSLGFGVM 
FFTLFLDYQK LKAVSFWLYL ATVVLLAAVL VVGKEVNGSK RWLELAGFQF QPSELMKIVI
VIQLASYFST QEMTSYPPLK KLLTPLAFVA APVLLILAEP DLGTAICILA ISGTVIFFMG
IRWKYILAMM IGVIPLLMPI WMTVLKPYQK RRIEILLRPD LDPLGAGYHI RQSKIAIGSG
MLWGKGFLNG TQNKLHFLPE KHTDFIFSVW AEEWGFVGCL VLLVLFGLLV FLSLRVARRS
KDRYGALLVV GMTALILWQA LINIGMVIGL LPVVGITLPF VSYGGSSLIT LCFAIGIIES
VSMRRYVFQT R