Gene Sfum_2450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2450 
Symbol 
ID4459235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3029273 
End bp3030073 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content59% 
IMG OID639703216 
Producthypothetical protein 
Protein accessionYP_846565 
Protein GI116749878 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAT CGGCTGCCCA TGAACGCTCC GAGAGCACAA CGATTCTTTT CCTGCGGCAT 
TTGACCAGTA TCGCCTACCT CTTTCGGGAC ACCATGCGAT GGGCGATCGT CAAGCCGTTG
CAGGGCAAAC CTCTGCGTCT CAGGGCGGCG CTGATCCAGA TGGATGAGGT GGGGGTGAAG
TCGATTCCTA TCGTTGCGCT GGTGTCCTTC GTGATCGGCA TCATTCTCGT GCTTCAGACC
GCCTACCAGC TGGAAAAATT CGGGGCGATC AACTATGCGG CCAGCCTCGC CGGCGTGGCC
CTAACCCGGG AAATGGCGCC TCTGCTGACG GCGATCGTTG TTGCCGGGCG GGTCAGCGCG
GCCTTCACGG CGGAGCTCGG GACCATGCTC GTCACCGAGG AAATCCTGGC GCTGGAAGTC
ATGGCGATCA ATCCCGTCGC CTACCTGGTC GTGCCGCGGT TCATCGCCAT GCTGGTAATG
CTTCCGTGCC TCACCGTTCT CGCAGACCTG ATCGGCATGA TCGGCGGCTA CGCCGTGGGC
ACGACGGCGG TGGGGATTCG TTCCTCGCTT TATATCCAGA ATACGATTGA CGCGCTGCTG
CTCAAGGATA TCCTCACGGG ATTGACCAAG AGCGTGGTCT TTGCCGGCAT CATCGCCATG
GTCGGTTGCT ACATGGCTTT CGTGGTGCGT GGAGGTGCCG AAGGGGTGGG CAAGGCCACC
ATGATTTCCG TGGTGACGTC CCTGATCAGC ATCATCCTGG CGGATTGTTT TTTCACCACC
GTTTTCTATC TCTTTTTCTG A
 
Protein sequence
MSESAAHERS ESTTILFLRH LTSIAYLFRD TMRWAIVKPL QGKPLRLRAA LIQMDEVGVK 
SIPIVALVSF VIGIILVLQT AYQLEKFGAI NYAASLAGVA LTREMAPLLT AIVVAGRVSA
AFTAELGTML VTEEILALEV MAINPVAYLV VPRFIAMLVM LPCLTVLADL IGMIGGYAVG
TTAVGIRSSL YIQNTIDALL LKDILTGLTK SVVFAGIIAM VGCYMAFVVR GGAEGVGKAT
MISVVTSLIS IILADCFFTT VFYLFF