Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2125 |
Symbol | |
ID | 4459549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2600044 |
End bp | 2600520 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639702892 |
Product | phosphodiesterase |
Protein accession | YP_846243 |
Protein GI | 116749556 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000700609 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATCG TGGTGATGTC GGACACGCAC CTGGAGCGGG TGACCGACCG GTTCGAATCC CTGTGCGCCG CCTATTGCGA AGGGGCGGAT CTGGTGATCC ACCTGGGCGA CTGGGCGAGA CATTCGGTCC TGAATTTCCT GGAGCGCTAT CCCCTGGAAG CCGTGGCGGG CAACATGGAC GATTCCGGGA TACACGAAAG GCTCCCCGTA AAGAAAGTCA TCCGGGTGCG GGGGCACCGT CTCGGAATCA TACACGGTTG GGGATCGCCG GTCGGTTTGA GACACAGGCT CATGGACGAA TTCGAAAACG TCGAGGCGAT TCTGTTCGGA CACACGCACC AGGCGCTGCA ACTGGTGGAA CACGGCATAT TCTGGTTCAA CCCGGGCTCC GTTTATCTTG GACGCGGGGA ACGGGCCAAC AGCCTGGGAA TTCTCAATAT CGAGGACCGC ATAACGGGGG AGATCGTCAC TCTCTAG
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Protein sequence | MKIVVMSDTH LERVTDRFES LCAAYCEGAD LVIHLGDWAR HSVLNFLERY PLEAVAGNMD DSGIHERLPV KKVIRVRGHR LGIIHGWGSP VGLRHRLMDE FENVEAILFG HTHQALQLVE HGIFWFNPGS VYLGRGERAN SLGILNIEDR ITGEIVTL
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