Gene Sfum_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1985 
Symbol 
ID4459686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2428548 
End bp2429195 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID639702751 
Productradical SAM domain-containing protein 
Protein accessionYP_846103 
Protein GI116749416 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTGC GGGTGAACGA GATCTTCCAC AGCATCCAGG GGGAATCCGG GTATGCGGGA 
TGGCCCTGCG TGTTCGTGCG ATTGACCGGG TGCAACCTGC GCTGCTCCTA TTGCGACACC
CGGTACGCCT ACGATGAAGG AGACTTCGTC ACCCTGCGGG AGATCATCGG CCGGGTGCGT
CGGTTCGACT GCCCGCTGGT GGAAATCACG GGGGGGGAGC CTCTTCTCCA ACCGGAAACT
CCGGAGCTTG TCGCAGAACT GCTCGACCTG GGCCACACGG TGCTGGTCGA GACCAACGGC
AGCATGGACA TCTCCGTGGT GGACCGCCGC TGCGTGAAGA TCGTTGATTT CAAGTGTCCG
TCGAGCGGCG AGTCGGACGC CAATGATATG GAGAACCTGG AGCGCCTGGG ATCGCGTGAC
GAGATCAAGT GCGTCATCGG AACGCGGGAG GATTACGAAT TTGCCAGGGA GATCGAGCGG
TTGGCAGCGG AACGGGCCGG AACCGGCAGC ACGGTTTGTT TTTCTCCCGT TTTCGGCAAA
TTGGAGCCGA GGGAACTGGC TGAGTGGATC CTTGCCGATC GTCTGCGAGT CCGGCTCGGG
TTACAGCTCC ACAAGATCAT CTGGGAGCCG GATACACGAG GAGTCTGA
 
Protein sequence
MALRVNEIFH SIQGESGYAG WPCVFVRLTG CNLRCSYCDT RYAYDEGDFV TLREIIGRVR 
RFDCPLVEIT GGEPLLQPET PELVAELLDL GHTVLVETNG SMDISVVDRR CVKIVDFKCP
SSGESDANDM ENLERLGSRD EIKCVIGTRE DYEFAREIER LAAERAGTGS TVCFSPVFGK
LEPRELAEWI LADRLRVRLG LQLHKIIWEP DTRGV