| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1912 |
|---|
| Symbol | |
|---|
| ID | 4459783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 2332155 |
|---|
| End bp | 2332760 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639702679 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_846032 |
|---|
| Protein GI | 116749345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.436176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000739148 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGATTTTAC GGGGATTGCT GGAAACGGAC AGCTTTGTCG GGGGTATCCT CAATGCGATG
CCTCTGCCGG TGTTCGTCGT CGACGACGAC ATGGGGATCA TCGCCTACAA TCAGAGCGCC
TCGCAACTGC TGGGCAGCGA CCCGGAAACG GTCATCCGCA GACGCACGGG CGAGCTTCTT
CACTGCGTCC ATTCGTATGA AACCCAAGAA GGATGCGGCA GAGCCCCGCT GTGCAGGGAC
TGCATCTTGA GGAACGCGGT CGGAGAGTGT CTGCGGGAGG GCAAAGCGAT CCGCAGGAAA
GCCCTGATGG AGGTGGCGCC GAAAAGCGCC CCCGCCCGGA CGATCGACCT CTTCGTCACC
GCGGCGCCGT TCAAATACCA GGCGGGCGGA TACGCGCTCC TGGTGCTCCA GGACGTCACC
GAGCTGGTGG AACTGAGAAG TATCGTTCCC ATCTGTTCCT ACTGCAAGAA AATCCGCAAC
GACGCGCAGT ACTGGGACAG CGTGGAGCTG TACATCAAGA CGCACATCGA CGTGCAGTTC
TCGCACGGCA TTTGCCCGGA GTGTTTCGAG AAGGTCCGTT TGGACCGTCC CGAAAAGGAC
CCTTGA
|
|---|
| Protein sequence | MILRGLLETD SFVGGILNAM PLPVFVVDDD MGIIAYNQSA SQLLGSDPET VIRRRTGELL
HCVHSYETQE GCGRAPLCRD CILRNAVGEC LREGKAIRRK ALMEVAPKSA PARTIDLFVT
AAPFKYQAGG YALLVLQDVT ELVELRSIVP ICSYCKKIRN DAQYWDSVEL YIKTHIDVQF
SHGICPECFE KVRLDRPEKD P
|
|---|
| |