Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1877 |
Symbol | |
ID | 4459818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2294150 |
End bp | 2295898 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639702644 |
Product | hypothetical protein |
Protein accession | YP_845997 |
Protein GI | 116749310 |
COG category | [S] Function unknown |
COG ID | [COG4383] Mu-like prophage protein gp29 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGTGG TCATCTACGA TGCATTGGGA AGACCGGTTG AAACGTCCGC CACCCGGCGC CCGGACGTCC ATGAGCTCGC CGTGGTTCAA GTTCGGGACC GGTGGAGCAA TTATCCGTCG AACGGTCTGA CCCCGGAACG CCTCGCCCGG ATATTTCGCG AGGCTGACCA TGGAGACATG CTTCGCCAGG CCGAGCTTTT CGAGGAAATG GAGGAGAAGG ACGCCCACCT GGCCTCCCAG TTCCAGGTGC GCAAACTCGC GGTCCAGGGT CTTCCGTGGG AGGTGACCCC TCGCACGGAA ACCGCACGGG CGCGTGAAAC CGCCGCCTTC TGCCGTGACT TTCTCGAGGG GTTTACGGAC TTCGAGGAGC ATGTCCTGGA CCTCCTCGAT GCTCTGGCCA AGGGGTACAG CACGATGGAA ATTCTTTGGG AGACATCCGC GGGGCAAAGC CGCATCCGCG GCCTGCGCTG GGTTCATCCC AAGAAGGTGA CCTTCTGGGA CTCGGTCTCG CCGCGGATCC TCACCGTCGA AGAACCCGTT CGCGGCATCG ACCCTCCGCC CTTCAAGTTC GTCTATCACC GCTACAAGGC TCGATCCGGT CATGACACGC GCAGCGGCCT CATGCGGGTG TGCGCCTGGA TGTATCTTTT CAAGAACTAC TCGATAAAAG ACTGGGTGGC TTTCGCCGAG ATCTACGGGA TGCCCTTGCG CATCGGCCGC TACGAACCGG GGGCGAGCCG GATGGACCGC GAAGCGCTCG TCCAGGCCGT GAGGTCTCTG GGAACGGACG CCGCCGGCGT CATTTCCAAG TCCACGGAAA TCGAATTCAT CGAAACGCAA CGATCGTCCT CGCAGAACGT ATACGAAAGC CTGGCCCGGT TCTGTGACGC GCAGACGTCC AAGGCCGTTC TCGGCCAGAC GCTCACCAGC GAAGCCGGAA GCCCGGGCGG AACGGGCTCC TATGCCCTGG GCCGGGTACA CGGCGAAGTC CGCCACGATC TCGTCGCCGC CGACTGCAGA GCGCTCGGCA AAACAATCAC CCAGCAGCTC CTCGGACCGC TGGTCGGTTT CAATTACGGA TGGGATGCGC CCGTGCCGCG GTTCGGTTTC CTCTTCGAGC CGCCCGAAGA CCTGCGGGCC GCCGCCGAAA CCTACCGGAT TCTCGCCGAA ATGGGCTTCG ACCTGAGCCA GGAACATCTC AGCCAACGAT TCAAGGTCCC CGTTCGAAAA CCCGGGGAAA AACCTCTTGC AGCCCCGCTC AAGAACCCGG ACATGAACGG CGCTCGGGGC CCCGGCATTC GGGAGGGCGC ACCCAAGGGC GACGCGAAGC TTCGATCCGC CCTGCCGCCG GATGCACGGC AGCCGGTCCG CGCATCGGCA CTCCGCTTCG CTCCAGCTTC CGGCACACTC GGCACGGAGC CCCTCGAGCC GTCGTCCTCA ACGGAGTCGC AAGGCTCATC GCCTCCCGCG ACGGCAAACG ATTCCCCCGC GGGCGCAAGC GACCCCGGGC AGGAATCCGT GGACGCCATG GCCGACCGCA TGAACCGGGG TGAATCGCCG TTGGCGCCGC TATTCGATGC GATCTTCACG GCAATCGAGG AGGCGGGCTC CTACGAGGAG CTTCTCGAGT CCGTGTACGC GGGCTACGAC ACGCTTCATA CGGCGCGGCT GCAAGAAGCC CTTCACCGGG CCGTTTTCGC GGCCAACCTC CTGGGTTACC TCACCGCCGC GGAGGAATCC CGATCATGA
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Protein sequence | MSVVIYDALG RPVETSATRR PDVHELAVVQ VRDRWSNYPS NGLTPERLAR IFREADHGDM LRQAELFEEM EEKDAHLASQ FQVRKLAVQG LPWEVTPRTE TARARETAAF CRDFLEGFTD FEEHVLDLLD ALAKGYSTME ILWETSAGQS RIRGLRWVHP KKVTFWDSVS PRILTVEEPV RGIDPPPFKF VYHRYKARSG HDTRSGLMRV CAWMYLFKNY SIKDWVAFAE IYGMPLRIGR YEPGASRMDR EALVQAVRSL GTDAAGVISK STEIEFIETQ RSSSQNVYES LARFCDAQTS KAVLGQTLTS EAGSPGGTGS YALGRVHGEV RHDLVAADCR ALGKTITQQL LGPLVGFNYG WDAPVPRFGF LFEPPEDLRA AAETYRILAE MGFDLSQEHL SQRFKVPVRK PGEKPLAAPL KNPDMNGARG PGIREGAPKG DAKLRSALPP DARQPVRASA LRFAPASGTL GTEPLEPSSS TESQGSSPPA TANDSPAGAS DPGQESVDAM ADRMNRGESP LAPLFDAIFT AIEEAGSYEE LLESVYAGYD TLHTARLQEA LHRAVFAANL LGYLTAAEES RS
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