| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1666 |
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| Symbol | |
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| ID | 4460038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2044644 |
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| End bp | 2045429 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702435 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_845788 |
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| Protein GI | 116749101 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0056205 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGT ACGATCTCCC GGAAAGAAAA AACTTCAAGC TCATCCTGGA ATACGATGGT
TCTCACTACC ACGGATGGCA AAGACAGCTG GGGGTGCTGA CCATCCAGGA GGTGCTCGAA
TCCCGGTTGG AGGTCATGCT GCAATCGCCC GTCGGTGTTC GTGCATCGGG CCGGACGGAC
GCGGGTGTCC ATGCCTGCGG CCAGGTCGTG AACTTCCACG TCCACACCCG GTTGAGGCCC
GAGGAGATTC TGCGCGGCAT CAACAGCCTC CTGCCGCCCG ACATCGTCGT GCTGCACGCC
GAGGTGGCGG CCGAGTCCTT TCATGCGCGC TTTTCCGCCA CGGGGAAGAC CTACGAGTAC
CACATATTGA ACAGGCCCAT ACGATCCGCC CTGCAGCGCC GATATGCATG GCACGTTCCC
CAGCCGCTGG AACCGCAGCG CATGCGCGAA TGTCTCGGAA GCCTGCTGGG GCGGCATGAT
TTCGCGGCTT TCATGGCATC CGGCTCCAAG GTGAAATCGA CGGAGCGGAC CATTCGAAGG
GCCGACCTGG ACTGCCTGGA AAATGGGGAA ATGAGGCTCG TATTCGAGGC AAACGGTTTC
TTGAGGCACA TGGTGCGAAA TCTCGTGGGA ACGATCGTCG AGGTGGGCAG AGGGGTGCGG
GCTCCCGAAG AGTTCCTCGA CATCCTGTCG AGCAGGGATC GCAAACGCGC GGGGATGACC
GCTCCGGCGC ATGGTTTGTT TCTGACGGCC GTGCACTACA CTGAAGACCT GACCTGCAAC
TCTTAG
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| Protein sequence | MNQYDLPERK NFKLILEYDG SHYHGWQRQL GVLTIQEVLE SRLEVMLQSP VGVRASGRTD
AGVHACGQVV NFHVHTRLRP EEILRGINSL LPPDIVVLHA EVAAESFHAR FSATGKTYEY
HILNRPIRSA LQRRYAWHVP QPLEPQRMRE CLGSLLGRHD FAAFMASGSK VKSTERTIRR
ADLDCLENGE MRLVFEANGF LRHMVRNLVG TIVEVGRGVR APEEFLDILS SRDRKRAGMT
APAHGLFLTA VHYTEDLTCN S
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