| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1400 |
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| Symbol | |
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| ID | 4461595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1738935 |
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| End bp | 1740542 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702168 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_845526 |
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| Protein GI | 116748839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.736343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.560132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCA CCTGTCTCGG CGCCTCCGGC TGCGTCACCG GCTCCTCCTT TCTCCTCGAC
AACGGCAGCA AGTACCTGAT CGACTGCGGC CTGTTCCAGG GCGGCAAACA GATGGAGGCC
TTGAATCGGA AGCCCTGGCC GTTCAACCCC GCCGATGTTT CGGCGCTTTT TCTCACGCAC
GCTCACATCG ATCACTGCGG ACGCATCCCG AAGCTGGTGA AGGACGGTTT TCGCGGCCGA
ATCTACACAA CGCTCCCCAC CGCGGAGCTT TGCAAGATCC TTCTCCTCGA TTCGGCGCAC
ATCCAGGAAA TGGAAGCCGA ATGGCAGACA CGCAAGGGGC GCAGAGTCGG CGAACAGGAT
GTGGAACCGC TCTATACCGT TGAAGACGCA ACCGCATGCT TCCCGCTCTT CAGCGTGGTC
GACCAGAACG AACCCATTAC GGTCAACGAC GATCTGAAGG TCTGCTACCG CAATGCGGCC
CACATTCTGG GGGCCTCCAT GCTGGAAGTG TGGAACGGCG GGCAGCCGCA GCCCTACAAG
GTCGTGTTTT CCGGGGATAT CGGGTACCGG AGGCAGCTGA TCGTGCGCGA TCCCGAGCCG
ATTGCCGACG CGGACATGCT TTTTGTGGAA TCGACCTACG GGAACAGGAA TCACAAGTCG
TTCGACGAGA GCCGGAAGGA GTTGCTCGAG GCCATACAGT TCAGCTATCG CCACCGCGAG
AAGGTCATCA TTCCCGCCTT TGCGGTGGAG CGCACCCAGG AGTTGCTCTA CGTGATCGGG
GACTTCTTCC GGAAGAAACT CATCCCCTCG ATGCCCCTTT ACGTGGACAG TCCGCTGGCC
ATCGCCGCCA CCGACATCTT CCGCCGCATG AAGGACTTCT ACGATATCGA AACGCGCGCC
ATCCTGGACT CGGGCAACGA TCCGTTCGAT TTCCCGGAAC TGGTGCTCTC CCGCTCTTCA
CAGGAATCCA TGGCGATCAA CCAGGCTGCG GGACCGGCCA TCGTCATAGC CGGGAACGGC
ATGTGCACCG CCGGCCGCAT CAAGCATCAC CTGAAGCACA ACCTGTGGCG TGCGGGATCG
TCGGTGGTTA TCGTCGGTTT TCAGGCTGAA GGCACTCTGG GGCGCAGACT CGTGGAAGGC
GCCGAATCGG TCAAAGTGCT GGGCGAAAAG GTGGTTGTGA AGTCGAAAGT GCATACCATC
GGAGGTTTTT CAGCTCACGC CGATCAGCGT TCTTTGCTGG AGTGGCTCGG TCATTTCAGG
AATCCGGCGA TGCGGGTTGT CGTCATCCAT GGTGAAGAGT CGACCAGCAC GGAATTTGCC
GAGATCGTAA ACAAACGTTT CGGTTTTCCC GTCCACGTGC CTGCCATCGG GGACGTGATC
ACGCAGGAGG CGATCGAGTC GCCGGCCATA CGCGAAAAAC TCATGGAAGT GGCCGCCGGG
CCGCCGCTCG CCGGGATCAT TCAGACGGCC GAACAGATCA AGAGCCTACT TGGAGAGGCT
CCCGAGAGGT TGCCTCACAC AACCCTGCAA CACCTTGCAC TTGATTTGAC CGATGCCGAG
AATCGCCTGC GGGAAATTTT GCAGGAACTC CAGAAGGAGA AAAGGTAG
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| Protein sequence | MHITCLGASG CVTGSSFLLD NGSKYLIDCG LFQGGKQMEA LNRKPWPFNP ADVSALFLTH
AHIDHCGRIP KLVKDGFRGR IYTTLPTAEL CKILLLDSAH IQEMEAEWQT RKGRRVGEQD
VEPLYTVEDA TACFPLFSVV DQNEPITVND DLKVCYRNAA HILGASMLEV WNGGQPQPYK
VVFSGDIGYR RQLIVRDPEP IADADMLFVE STYGNRNHKS FDESRKELLE AIQFSYRHRE
KVIIPAFAVE RTQELLYVIG DFFRKKLIPS MPLYVDSPLA IAATDIFRRM KDFYDIETRA
ILDSGNDPFD FPELVLSRSS QESMAINQAA GPAIVIAGNG MCTAGRIKHH LKHNLWRAGS
SVVIVGFQAE GTLGRRLVEG AESVKVLGEK VVVKSKVHTI GGFSAHADQR SLLEWLGHFR
NPAMRVVVIH GEESTSTEFA EIVNKRFGFP VHVPAIGDVI TQEAIESPAI REKLMEVAAG
PPLAGIIQTA EQIKSLLGEA PERLPHTTLQ HLALDLTDAE NRLREILQEL QKEKR
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