Gene Sfum_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1044 
Symbol 
ID4460652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1289082 
End bp1291202 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content60% 
IMG OID639701808 
Producttranslation elongation factor G 
Protein accessionYP_845173 
Protein GI116748486 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000201593 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00441639 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACTTGTG CTCGGAATTT CAATATCTTT ACGGGTCACC TTCGTCCCGT TACTGTTTTT 
TTACAATCCG AAAGAATACT TATGGCGGTA CCGCAGCTCA AATCCTTTCG CAACATCGGC
ATCATCGCAC ACATCGATGC CGGCAAGACC ACCGTGACGG AACGGATCCT CTTTTACACG
GGTCGATCGC ACAGGATGGG AGAAGTGCAC GACGGCACGG CCGTGATGGA CTGGATGGAG
CAGGAGCAGG AGCGCGGGAT CACCATCACT TCGGCCGTGA CGACGTGTCA GTGGAACCGC
CACGAACTCC ACCTGATCGA CACTCCCGGC CACGTGGACT TCACCATCGA AGTAGAGCGG
TCCCTGCGCG TCCTGGACGG AGCCATTGCG GTGTTTTGCG GTGTGGGAGG GGTTGAGCCC
CAGTCGGAGA CGGTGTGGCA TCAGGCCGAC CGGTATCACG TCCCGAAGAT CGCCTTTGTC
AATAAACTGG ACCGGCTGGG TGCCGACCTG GATCAGGTCG TCGAGCAGAT TGAGCGCAAG
TTCAAGACCA TCCCCCTGGT TTTGCAGCTT CCCGCGGGCC GGGAATCCGA TTTTCGCGGG
GTTGTCGATC TCATCGGCAT GCGGCAGATC GTTTTCCACG ACGAGACGCT GGGAGAGCGA
TACGAATACG TGGATATCGA GGCCTCGTTG CGGGACAGAG CGCTCGAAGC GCGTGACCGT
CTGGTTGCGA AGGTGGCCGA ATTCGACGAT CACCTCATGG AACGATACCT GGAAGGCATG
GAAATTTCGG CCGCCGACCT GGTTCCCGCC ATCAGAAAGC TCACCCTGGA CCTCAAGGCG
GTTCCCGTTC TCTGTGGCTC CGCCCTGAAG AACAAGGGAA TCCAACCGCT GCTCGACGCC
ATCGTCGATT TTCTTCCTTC TCCCCTGGAC GTTCCGCCCA TCGAAGGCAG AGCTCCGGTC
ACCCACGCCG TCGAGCGCAG ATCGAGCAGT GAGACGGAAC CTTTTGCGGC GCTTGCCTTC
AAGATCCAGA TGGACCAGGG ACGCAAGCTG ACGTACGCCA GGATCTATTC GGGGCGGCTG
CAGGTGGGAG ACGACGTTCT CAACGTTTCC AAAGGAACGC GAGAGAAGGT CTCCCGGATA
TTTCAGATGC ACGCCAACAA GCGCGACCGG CTGGAAAAGA CCGGAGCGGG CAACATCGTC
GTTCTCATGG GTCTCAAGTC CGCCGGCACC GGCGATTCCC TGTGCGACCC GGCGCATCCC
GTCCTGCTCG AACCCGTCAA TGTGTATGAG CCCGTGATTT CCATCGCCGT GGAGGCCCAA
AGCAGAGCCG ACCAGGAAAA GCTCCTGGAC AGCCTGGCCA AGCTCTCGGA GGAGGATCCG
ACGTTTCGCT TTCAGGAGAA TCCGGACACC GGGCAGACCA TTATCAGCGG GATGGGGGAA
CTGCACCTGG AGATCGTGCT CACGAGGCTC GACCGGGACT TTAATGTGGA AGTCAACGCG
GGCAAGCCGC AGGTGGTTTA CCGGGAAACC ATATCCCGGG AAGCGGAGGC GCAGGCCGTA
TTCGATCGCG AAATCGGCGG CGTGCGGCAC TACGGCGTGG TCGACATCCA CCTGGCGCCT
CGCCGGAGAG GCCAGGGGAA CACCACTCTG GTCAAAGTCA GGGATGCTTC CATTCCGGAG
GTCTTCTTCC CGGCCATGGA ACAGGGAGTT CAAGATGCAC TGAGCAGCGG CCCGCAGCTC
GGCTATCCCG TGGTTGATGT GGAAGCGGTG ATTTTCGGCG GCGCGTTTCA GGACGGCGTT
TCCAGCGAAC TGGCGTTCCG GGTGGCCGCA TCCATGGCCT TCAAGAAAGC GTGCGAACAG
GCTTCCCCGA CGTTGCTCGA ACCATTCATG GCAGTGGAAA TCCTGGTTCC CGAGGAGTTC
CTCGGCGAGG TGCTCGGCGA CATCAATCTG CGCAGAGGCC GCGTGGAAAA CATCTCCATC
CGCAAAGCCA TTCAGGTCGT GCAGGCCGTG GTGCCCCTTT CACGGATGTT CGGCTATTCC
ACCGCCCTGC GGTCGGCAAC CCAGGGCCGG GCCACCTTCA CCATGCACTT CTCGCACTAC
GACGTGGCAT CCCAGGGATA G
 
Protein sequence
MTCARNFNIF TGHLRPVTVF LQSERILMAV PQLKSFRNIG IIAHIDAGKT TVTERILFYT 
GRSHRMGEVH DGTAVMDWME QEQERGITIT SAVTTCQWNR HELHLIDTPG HVDFTIEVER
SLRVLDGAIA VFCGVGGVEP QSETVWHQAD RYHVPKIAFV NKLDRLGADL DQVVEQIERK
FKTIPLVLQL PAGRESDFRG VVDLIGMRQI VFHDETLGER YEYVDIEASL RDRALEARDR
LVAKVAEFDD HLMERYLEGM EISAADLVPA IRKLTLDLKA VPVLCGSALK NKGIQPLLDA
IVDFLPSPLD VPPIEGRAPV THAVERRSSS ETEPFAALAF KIQMDQGRKL TYARIYSGRL
QVGDDVLNVS KGTREKVSRI FQMHANKRDR LEKTGAGNIV VLMGLKSAGT GDSLCDPAHP
VLLEPVNVYE PVISIAVEAQ SRADQEKLLD SLAKLSEEDP TFRFQENPDT GQTIISGMGE
LHLEIVLTRL DRDFNVEVNA GKPQVVYRET ISREAEAQAV FDREIGGVRH YGVVDIHLAP
RRRGQGNTTL VKVRDASIPE VFFPAMEQGV QDALSSGPQL GYPVVDVEAV IFGGAFQDGV
SSELAFRVAA SMAFKKACEQ ASPTLLEPFM AVEILVPEEF LGEVLGDINL RRGRVENISI
RKAIQVVQAV VPLSRMFGYS TALRSATQGR ATFTMHFSHY DVASQG