| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0904 |
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| Symbol | |
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| ID | 4460301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1114427 |
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| End bp | 1115281 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639701667 |
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| Product | rhomboid family protein |
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| Protein accession | YP_845035 |
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| Protein GI | 116748348 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTC AAGGCAGGCG TTCGATTCTA TGCCCGAACT GCAGGAGGCT CATCAGCACG
GACGAGACCT CCTGCCCTCA CTGTGGATTG TCCCGTCCCG GTTCCCGCTG GAGAAACAAC
TTGTGGACCG GGAATTTCTT CAGCTCTCAT CAGCTCGTTC GGACGATCAT TTTCATCAAC
GCGGGCATGT TTGTCCTGTC GCTTATCATT GCCCCGAGCT CCGCCGGTTT CTCCATGAAC
CCGCTCAACT TTCTGTCTCC CGGCAGCAGG AGCCTGTTGC TCCTGGGGGC GACGGGAAGG
ATTCCCATAG ACCAGTTCGA CCGCTGGTGG ACCCTGCTGT CCGCGAGCTA CCTGCACGGC
AGCATCCTTC ACATCCTGTT CAATATGATG GCGTTCAGCC AGATCGCTCC CCTCATTGTT
CATGAATACG GCGCGTCCAG GACCCTGGCC ATTTACACCT TGAGCGGCAT CGGCGGGTAC
GTGCTCTCCT ACTTCGCGGG GACCGCCGTC ACCCTGGGCG CTTCCGCCGC CGTCTGCGGA
CTCATCGGCG CGGCCCTTTA CTACGGCAGG AGCCGCGGGG GCCAGTTCGG CCAACTCGTC
TACCGCCAGG TGAGCGGCTG GGTGATCGGC CTTTTCATTT TCGGGTTTCT GTTTCCGGGA
ATCGACAATT GGGCGCACGG GGGCGGATTA CTGACCGGAA TACTGGCCGG GTTTGTACTC
GGTTACCAGG AACGGCAGCC CGAGCGGCTC CTGCACAAAA CCGTCGGCAA CCTGTGCGTC
ATTGCCACCG CGCTGACACT GGTTTATGCC GTCGGCACTT CCTTCCTGAT CATTTTTCGC
GTCGGGCTCG GATAG
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| Protein sequence | MDIQGRRSIL CPNCRRLIST DETSCPHCGL SRPGSRWRNN LWTGNFFSSH QLVRTIIFIN
AGMFVLSLII APSSAGFSMN PLNFLSPGSR SLLLLGATGR IPIDQFDRWW TLLSASYLHG
SILHILFNMM AFSQIAPLIV HEYGASRTLA IYTLSGIGGY VLSYFAGTAV TLGASAAVCG
LIGAALYYGR SRGGQFGQLV YRQVSGWVIG LFIFGFLFPG IDNWAHGGGL LTGILAGFVL
GYQERQPERL LHKTVGNLCV IATALTLVYA VGTSFLIIFR VGLG
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