| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0753 |
|---|
| Symbol | |
|---|
| ID | 4461689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 922692 |
|---|
| End bp | 923126 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639701515 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_844886 |
|---|
| Protein GI | 116748199 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02801] TolR protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0347505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCGA ACGGCGGTGA ATCCAAGGGG ATGCTCTCCG AGATAAACGT CACGCCATTT
GTGGACGTGA TGCTGGTGCT GTTGATCATA TTCATGGTGA CCGCTCCGAT GATGACTCAG
GGCATCGACG TGAAGCTTCC GGAATCGTCG GCGCCGGCCA TTCCTTCGGA GGATGAGCGC
CTGATGGTCA CGGTCACGCA GGACAAGCGG ATCTACATCA ACGACAATGC GGTGGACATT
GCGTCCCTGG GGACGAAACT GGCCGCCATC TATCAGAATC GTCAGGAGCA CAAGGGCGTC
TTCCTTCGCG CCGATGAGCA GATACCGTAC GGGTTTGTGG TCCAGGTCAT GGGGACGATA
CGGCAGGCGG GAATAGACCA GATCGGGATG GTCACCGAAC CGCTCAAGGG GCCGATAAAA
TCCACACAAC GGTGA
|
|---|
| Protein sequence | MQANGGESKG MLSEINVTPF VDVMLVLLII FMVTAPMMTQ GIDVKLPESS APAIPSEDER
LMVTVTQDKR IYINDNAVDI ASLGTKLAAI YQNRQEHKGV FLRADEQIPY GFVVQVMGTI
RQAGIDQIGM VTEPLKGPIK STQR
|
|---|
| |