Gene Sfum_0741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0741 
Symbol 
ID4460824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp907817 
End bp909343 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content61% 
IMG OID639701503 
Product5'-nucleotidase domain-containing protein 
Protein accessionYP_844874 
Protein GI116748187 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0181082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC ACATCGCCTC CGTTTTATGT GTCCTTCTCA TTCTTGTCTT GGCTCCCTTT 
GCCGCCGCCT CGGGCGGTCC CCCGGTCCGG GAACTGACCG TCCTGCACGT CAACGATTTT
CACGGACGCC TCATGCCCTT TCTGGAAAAG AGCCTCGACT CGGCGACGGC CATCGGCGGA
GCCGCCTACC TGGCGGAGAT GATCCGTCGG GAGCGGGACA CCGCCGGCCC GCAGAGCACC
TTCTTGCTTT CAGCCGGAGA TATGTTCCAG GGGATGGCAA TCTCCAACGT ATTCAAAGGA
CGCCCGGTCA TAGAGTTCAT GAACGCCGTC GGATTCGAAG CCATGACCGT CGGCAACCAT
GAATTCGACT GGGGACGGGA TACCCTGAAC ACCCTCATCG CATCGGCCGC GTTCCCTTTT
CTCGCGGCCA ACGTCACCGA CACCGACGGC ACCCCGCTCC GGGGCACTCG GCCTTACATA
CTGCTGGACA AGAGCGGCGT GAAAGTCGCG GTCATCGGCA TCACCACCGT CGAAACTCCA
TACAGCACCA ACCCGACCAA TGTCGCCGGC CTGGTCTTCC GCAAACCGGA AAAGGTCCTT
CCCGGGCTCA TCAGAAAGGT CAGGCGCCAG GGCGCAAAGC TGGTGATCGT GCTGTCCCAC
CAGGGCCTCG ACGCGGACAA GAGACTCGCC GGTTGCGTTC GCGGAATCGA CGTGATCGTG
GGAGGACACA GTCACACCGC CGTCACCGTC CCGGTGAAGG TCCGCAATAC GATCATCGTA
CAGGCCGGCT CCTATGGAAT GTACCTGGGC GTACTCCATC TGAAAATCGA CCCGACAACG
GGAAGGGTCC TTCATGCCGC CGGTGATGAC GAGCTCAGGC TGGTCAGTGC CGGGCCTGAC
GATCCCTACG ACCGTACCGT CGCCGGTATG GTCAACCAAT ACGGTGAACT CATCGGCAAG
GAATTCTCCG TGGTGGTCGG ACGGACTTTG ACGGACCTCG AACGATCGCC CGACAAGGAG
TCCAACGTGG GAGACCTCAT TGCGGACGCG ATGCGGGAGT CGACGGGGGT TGCCGTCGCC
TTCCACAACA GCGGTGGGAT CAGGGCCAAC ATACCGAAAG GGGACATCCG CGTGGAACAG
ATCTACGCCG TCCTTCCCTT TGACAACGCC CTGACCGTCA TGGACCTGAC AGGTCGCCAG
ATCAGGGAAA TCCTCGAATT CAGCGCCGGT TGGAGAAAAG ACGTGCTCCA GGTTTCCGGC
CTTCGGGTCG TCTACGATCC GTCGCGACCG GCGGGTTCGC GCGCCGTCCG GGTTACCGTA
GGTGAGAGCC CGCTGGATGA TCGGAAGACC TACAGGATCG TCACCAATGA CTTTCTGGCA
GCCGGCGGAG ACCGGTTCGA AACCTTCAAG CACGGGAAAA ACATCACCTT CGGGGACAAT
TTGCGGGATG TTCTGGTGGA GTATCTGAAG AAACATTCGC CGGTCGCTCC CGCAGTCCAG
GACAGGACCA CCTTTGTCAA CCGCTGA
 
Protein sequence
MKKHIASVLC VLLILVLAPF AAASGGPPVR ELTVLHVNDF HGRLMPFLEK SLDSATAIGG 
AAYLAEMIRR ERDTAGPQST FLLSAGDMFQ GMAISNVFKG RPVIEFMNAV GFEAMTVGNH
EFDWGRDTLN TLIASAAFPF LAANVTDTDG TPLRGTRPYI LLDKSGVKVA VIGITTVETP
YSTNPTNVAG LVFRKPEKVL PGLIRKVRRQ GAKLVIVLSH QGLDADKRLA GCVRGIDVIV
GGHSHTAVTV PVKVRNTIIV QAGSYGMYLG VLHLKIDPTT GRVLHAAGDD ELRLVSAGPD
DPYDRTVAGM VNQYGELIGK EFSVVVGRTL TDLERSPDKE SNVGDLIADA MRESTGVAVA
FHNSGGIRAN IPKGDIRVEQ IYAVLPFDNA LTVMDLTGRQ IREILEFSAG WRKDVLQVSG
LRVVYDPSRP AGSRAVRVTV GESPLDDRKT YRIVTNDFLA AGGDRFETFK HGKNITFGDN
LRDVLVEYLK KHSPVAPAVQ DRTTFVNR