| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0184 |
|---|
| Symbol | |
|---|
| ID | 4461534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 218770 |
|---|
| End bp | 219822 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639700939 |
|---|
| Product | HflK protein |
|---|
| Protein accession | YP_844321 |
|---|
| Protein GI | 116747634 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01933] HflK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.464888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.739242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTGGC AGAATCCGCC CGGTAGAACG CCGGGACACG ACAGTTTCAA AGATTTCGAG
GAGATCCTGG CACGTCTGAA GAACCGGTAC AAGCTCCCTC CCATCACCGG AGGGCCGGTG
TTTCTGATCG TGCTCGTCGC AGCGATGATC CTCATCGGTT ACAACAGCTT CTACATCGTC
CAGCCCCAGG AAACCGCCGT CATTCAAAGG TTCGGAGCAT ACAGTCACAC GGCTGAGGCC
GGGTTGCACG CGAAACTGCC TTTCGGCATC GACACGGTGC GGAAGGTGCC CACGGGGAGA
GTCCTGCAGC ACGAATACGG CTATCGCACC GTCAAACCGG GGGTGCGCTC CACGTTCAAG
GAAAAGGAGT ATGAAGAGGA AGCCGTGATG CTCAGCGGCG ATTTGAACGT GGTCAACCTG
CAGTGGATGG TGCAGTACAA GATACAGAAC CCGGCGGACT TCCTGTTCCG GGTGCACGAC
GTGGAAGGCA CGCTGGACGA TATTTCGGAG TCCGTGGTGC GCCGCATTGT GGGAAACCGT
TACTCGGACG ACGTCCTGAC CGTGGGACGG GCATCCATTG CGGACATGGC CAAGGTCGAG
ATCCAGGCCA TCCTGGATAC CTACCAGACA GGCGTCAAGA TCGTGACCGT GCAGCTGCAG
AATGCAAATC CGCCGGATAT GGTGAAGGCC GCCTTCAACG AGGTCAATGA AGCTCAGCAG
GAACGCGAGC GGATGATTAA CGAGGCCCAG CAGGCTTACA ATCAGAAAAT TCCGAAGGCC
ATGGGCGAGG CGCGACAGGC GATTTCCCAG GCCGAAGGGT ACGCCCTGGA GCGGGTGAAT
CGCAGCCAGG GCGAGGTCCA ACGTTTCCAG AACATTCTTG CCGAATACGA GAAAGCCCCG
GATGTTACGA GGCGGCGCAT GTACCTGGAT GCCATGGGAG AACTCATGGG GCGGGTGGAG
CATCTTTACG TCATCGACGA GAACCAGCGG AACCTGTTGC CCTTGTTCGA CCTGAACAGG
GGAAACAAAG GCGACGCGAA ACCTGGAAAG TAG
|
|---|
| Protein sequence | MVWQNPPGRT PGHDSFKDFE EILARLKNRY KLPPITGGPV FLIVLVAAMI LIGYNSFYIV
QPQETAVIQR FGAYSHTAEA GLHAKLPFGI DTVRKVPTGR VLQHEYGYRT VKPGVRSTFK
EKEYEEEAVM LSGDLNVVNL QWMVQYKIQN PADFLFRVHD VEGTLDDISE SVVRRIVGNR
YSDDVLTVGR ASIADMAKVE IQAILDTYQT GVKIVTVQLQ NANPPDMVKA AFNEVNEAQQ
ERERMINEAQ QAYNQKIPKA MGEARQAISQ AEGYALERVN RSQGEVQRFQ NILAEYEKAP
DVTRRRMYLD AMGELMGRVE HLYVIDENQR NLLPLFDLNR GNKGDAKPGK
|
|---|
| |