| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0005 |
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| Symbol | |
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| ID | 4460154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4738 |
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| End bp | 6567 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639700758 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_844144 |
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| Protein GI | 116747457 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.910602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.795946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAGCC AGTTTCTGTA CTTCATCATA GTCCTGCTGC TTTTCACGAT GCAGCAACCG
GGCTCCTCGG CCTCGCTGTC CCTGCCGCTC ACCGCATCGA TGGCCGCCGC CGTCTGGGGA
CTGCTGGCGT TGGCGGCCTA CCGTGCGTGC CGGGGAATGA GTCTTGCCGC ATCCGATTTT
TCGCAGTCAA ATCTTGCGGC CCGTTACCAC AGGCTGCAAT TCCGGCTGCA AATCCTTGCG
CTGTCCTGCT TTGCCTTCGA AGTTTACGTT CTGGACGTCA AGTTCTATTT CAACCTGATT
CCATTCGTCG AAAAATCTCT TTCCCTCTCG GGTCTCATCG GACTGGCCCT GTATCTCTCG
CACACGACGG TGATCTGGTT TTTCAGCCAT CCGGCCTATC AGGCCGTCTT CCGATCCGCC
ATACGTCGCT CGGCGTTCAT AAAGACGCAT CTTTCCTTCA GTTCCGCGAT CCTTTTGTCG
TGGCTGCTGG TCGCGATCGC TTCCGACCTG CTGGAGGCGT TCAAACCGTT CCCTCCCAAA
TGGACCGCGA CCGGAGAATA TGCCGTTCTG GCCGGGGTCA TGGTTTTGTT CATGTTCTTC
GCTCCGGGCC CGGTGGTCCG TCTGTGGGGA TGTCGGCCGC TGCTCGAGCA GCCTTTGCGC
GCCGAACTGG AAATCTTCTG CCGAAAACAC GGGTTCCGCG TCGGCGACTT CATGCTCTGG
CCCCTCTTCG GAGGCGAGAT GCTCACGGCC GGGATCGTGG GCGTCCTGCC CCGCATGCGC
TATATCCTGG TGACCCGCGG ACTTCTGTCC ATCCTCAATC CCGAAGAGCT CAGAGCCGTG
GTCGCCCATG AAATGGGACA CGTACGACGT TTCCATCTGC CCATGTTTTT GCTGTTTCTT
CTGTCCTACC TGCCCGTTGC GGGTGTCGTG AGCACCCTTT TCCTGTTCGT TCTGCTCGAT
CAGGACATTG TCCTCGAATG GGTGCTCTCG GCCGGTGCAG GCGCGCCCGA ACGCATCTCG
ATCATCTCGA GCGTATTGAT CGTATTGCTC TTCCTCGTGT TTTTCCGCTT CATCTTCGGC
TATTTCCTCC GCAACTGCGA ACGCCAGGCC GATCTTTACG CGATGAACCT GATGGGAGAT
CCTTACCCCC TGATCACCTC GCTGCAGAAG ATCGCGCTGC ACAGCGGCCG GATCGAAGAC
CTGCCAAGCT GGCACCATTA CAGCATCCGG CAGCGCATCG AGTGCCTGAT CGATTCCTCC
CGCGATACGA CGCTCATACG TCGGCACAAC CGAAAACTCT ATGCCTCGGC GCTCGCCTTC
TTCGTCTCGG TCGCGGTTGT CTTCACGACC GTCACCGGCC TGTTGAATTC ATCCGGCATG
AGGAAGTGGA CCTTCAATCC GGACCGAGAC AGCGTCGAAC GGGCACTTCG GGAGGAGCCC
GGGAACCCCG ACCTTCTGGC CTCATACGGC GGGCTGCTCC TCGAAGCCGG CAGGATCGGC
GAAGCGGAGC GGCTGCTCCG GAAGGCCCTG CACCTCTCGC CGGACGATCC TTCCCTCATG
AACAACCTCG CTTGGCTCTA TGCGACCTCC CCGCCTCCGC ACCACAATCC CGAAGCCGCC
CTCAAACTCG CCGCCAAAGC GGCTGAATTG AGGTCCGACG CCGTAATTCT GGACACCCTG
GCAGAGGCCT ATTATGTGAA CGGGCGTTAC AGGGAAGCGG TGGATACCAT CGAGAAAGCG
CTTCGGCAGG CCCAATCGGA CCATTCCGAG TATCTGACCC ACAAAGAAAA ATACCAGAAG
GCCCTGGCGG CGGAGTCGGA CAGATCCTGA
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| Protein sequence | MYSQFLYFII VLLLFTMQQP GSSASLSLPL TASMAAAVWG LLALAAYRAC RGMSLAASDF
SQSNLAARYH RLQFRLQILA LSCFAFEVYV LDVKFYFNLI PFVEKSLSLS GLIGLALYLS
HTTVIWFFSH PAYQAVFRSA IRRSAFIKTH LSFSSAILLS WLLVAIASDL LEAFKPFPPK
WTATGEYAVL AGVMVLFMFF APGPVVRLWG CRPLLEQPLR AELEIFCRKH GFRVGDFMLW
PLFGGEMLTA GIVGVLPRMR YILVTRGLLS ILNPEELRAV VAHEMGHVRR FHLPMFLLFL
LSYLPVAGVV STLFLFVLLD QDIVLEWVLS AGAGAPERIS IISSVLIVLL FLVFFRFIFG
YFLRNCERQA DLYAMNLMGD PYPLITSLQK IALHSGRIED LPSWHHYSIR QRIECLIDSS
RDTTLIRRHN RKLYASALAF FVSVAVVFTT VTGLLNSSGM RKWTFNPDRD SVERALREEP
GNPDLLASYG GLLLEAGRIG EAERLLRKAL HLSPDDPSLM NNLAWLYATS PPPHHNPEAA
LKLAAKAAEL RSDAVILDTL AEAYYVNGRY REAVDTIEKA LRQAQSDHSE YLTHKEKYQK
ALAAESDRS
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