| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0454 |
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| Symbol | dapF |
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| ID | 4462611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 470142 |
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| End bp | 470981 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639699456 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_842885 |
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| Protein GI | 116753767 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.691704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC TGGAGTTCGT GAAGCTTCAT GGGAATGGGA ATGATTTCAT ACTCATAGAT
GAGCTGAACG GGGAGAGGAT ACCGGAAGAT GAGAAAAGCG AGGCTTCCAG GATTCTGTGC
CATCGCAACT TCGGCATCGG CGGCGACGGG GTTCTCTTTC TCGTACCCTC AGAAAGAGCG
GATATCGGCA TGCGCCTTTT CCAGCCGGAC GGATCTGAGG CCGAGATGTG TGGGAATGGG
ATACGCTGCC TCGCAAAGCA CGCGTGGGAG AGCGGCTATG TGGGGGAGAG ATTCTCTGTT
GAGACGCTGG CCGGCGTGAT CCCCATCCAG GTCAGAAGGG ATCGCAAGGG ATTCTGGGCG
AGGGTTGAGA TGGGCATCCC GAGATTCGAG CGCTCTGAGA TTCCCGCTGA TGGCGAGGGG
ACGTTCCTGA AGGTACCACT CCACGGCTTC GAGGTATCAG CTGTGAACAC CGGCGTCCCG
CATGCTGTGA TATTCGTCGA AAATCTGGAT ATCCCTGTAG AGCAGATCGC CCCCAAGATC
AGGCACAGCT CCTGCTTCCC GGAGGGGGCG AACGTGAACT TTGTGAGGTT GGGGAATCAT
CTTGAGGTGA GAACCTTCGA GCGCGGGGTC GAGGCCGAGA CGCTCTCGTG CGGCACAGGC
TCTGTGGCAG CGGCTGCAGT CGCGCGAAGA CTTGGCCTTG TGGGCGAGAC GGTTGAGGTC
ATGACGAAGG GCGGACCCTT GCGCATCTCG TTTGCAGGAG AGAAGGCCTT CATGGAGGGG
CCGGCTGTGA CCGTCTGCAG GGGCGTTGTC TCCGATGAGA TTCTGCAGAC GCTGCAGTAG
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| Protein sequence | MNQLEFVKLH GNGNDFILID ELNGERIPED EKSEASRILC HRNFGIGGDG VLFLVPSERA
DIGMRLFQPD GSEAEMCGNG IRCLAKHAWE SGYVGERFSV ETLAGVIPIQ VRRDRKGFWA
RVEMGIPRFE RSEIPADGEG TFLKVPLHGF EVSAVNTGVP HAVIFVENLD IPVEQIAPKI
RHSSCFPEGA NVNFVRLGNH LEVRTFERGV EAETLSCGTG SVAAAAVARR LGLVGETVEV
MTKGGPLRIS FAGEKAFMEG PAVTVCRGVV SDEILQTLQ
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