| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0093 |
|---|
| Symbol | |
|---|
| ID | 4463373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 85407 |
|---|
| End bp | 86447 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639699102 |
|---|
| Product | TGS domain-containing protein |
|---|
| Protein accession | YP_842535 |
|---|
| Protein GI | 116753417 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1163] Predicted GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0617741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG AGGAGGAGAT CAGGGCTCTG GAGGAGGAGA TCCTCAGAAC GCAGAAGAAC
AAGGCGACTG AGCACCACAT AGGTCGTCTC AAGGCGAAGA TAGCCAGGCT GCGCGAGGAG
CAGGAGAAAC GCACAGCGTC CAGGGCGAAG AAAGGGAAAG GTGTCAGGAA GTCTGGCGAC
GCAACGGTCA CACTTGTGGG TCCAGTGGGC GCTGGGAAGT CCACACTGGT GAGCAGGCTC
ACAGGAGCCA GGACCAGTGA GGACCCGTAC TCCATGGAAA TCACCCCCGG AATCCTGCAG
CACAGAGGTG CCAAGATACA GATTCTGGAC GTGCCTGACA TAACGGTCTC TGGCGATGCA
TTATCCGCTG TAAGGGACTC TGATCTTGTG CTGCTCGTCA CGGAACCGTA TGGTGGACAG
CTCGATCCCT ACCTGAACAG GCTCTACCAG AGCGGTGTCC GCCTGAACCA AAATCCTCCT
TCGGTTCTCA TAAGAAAAAC ATCGAGAGGC GGCATAAGTG TGACGAGTAC CGTCGACCCA
GGAATAGATA AGGGATCGAT TGAGGCCATA CTCAGGGAGT ACAAGATACA CAGCGCAGAT
GTTCTGATAA GAGAGCGGCT CACACAGGAG AGGTTTATCG ATGCTCTTGA GGCCAACAGG
CGGTACATAA AGGCCATCCA TGTGATGAAC AAGGTGGACA TCCTGGATCC AGATGAGCTG
GAGTTCGATG GTGATGTGAT ACCGACCTCG GCCGTCGATG GCACAGGTCT CGAGAGATTG
AAGGACGAGA TATTCGAGCG GCTGGATCTA ATAAGGATAT TTATGAAACC CCAGGGAAAG
CCGCCGGATC TAGACGAGCC CATGATAATG AGAAGGGGAG CTAACATAGG CGACCTCTGT
GACAGGATCC ACAAGGACTT CAGGCAGCGG TTCAGGTACG CGACCGTGTG GGGATCATCT
GCAAAACACA ACGGCCAGCG TGCAGGTCTC GACCACATTC TGAGCGATGG GGATATAGTG
ACAATTGTCC TGGAGAAGTG A
|
|---|
| Protein sequence | MSIEEEIRAL EEEILRTQKN KATEHHIGRL KAKIARLREE QEKRTASRAK KGKGVRKSGD
ATVTLVGPVG AGKSTLVSRL TGARTSEDPY SMEITPGILQ HRGAKIQILD VPDITVSGDA
LSAVRDSDLV LLVTEPYGGQ LDPYLNRLYQ SGVRLNQNPP SVLIRKTSRG GISVTSTVDP
GIDKGSIEAI LREYKIHSAD VLIRERLTQE RFIDALEANR RYIKAIHVMN KVDILDPDEL
EFDGDVIPTS AVDGTGLERL KDEIFERLDL IRIFMKPQGK PPDLDEPMIM RRGANIGDLC
DRIHKDFRQR FRYATVWGSS AKHNGQRAGL DHILSDGDIV TIVLEK
|
|---|
| |