Gene Bcen2424_5647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5647 
Symbol 
ID4452128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2761713 
End bp2762372 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID639697708 
ProductGntR family transcriptional regulator 
Protein accessionYP_839273 
Protein GI116693740 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0508113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.188641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAC AGGCAGGCAT GGAAGCCAAA CTCGACTCCA CGGCGGACGC GGTCGCCGCG 
TCGCTGCGCG ACATGATCAT CAACGGCGAG CTGGCGGCCG GCGAGCGGCT CGTCGAGCGC
GATCTGGCCG AGCGGTTCGG CATCAGCCGG ATTCCGATGC GCGAGGCGAT CCAGCGGCTG
GAACGCGAAG GCTTGCTCGA CATCTTCAGG AATCGCGGCG CGGTCGTGCG CATGCTGAGC
GTGTCGGATG TGCAGGAAAT CTACGATCTG CGCGTGCTGC TCGAAGGCGA TGCGATCTAC
CGCAGCGTGA AGCGGCTCGA CGACGAAACG CTCGCGCGCG CCGAACTCGT GCATCGGCTG
CTCGGCGATG CAACCGTGCC GCGCCGGCAG GGCGAGCTGA ACCGCGAATT CCATGCGTTG
CTGTATTCGT GCTGCGGCAA CGCGCGGCAA TTGAAGTCGA TCGCCGAACT GCGCGGCCAG
GTCGAACGTT ACGAGCGCCT GCAGGCCACG CTGCTCGCGG ATACGCCGTC GTTCCAGGTC
GAGCACGACG ACATCCTGCA GGCATGCCTC GAACGCAATG CGCGCGGCGC CCGCGCGATG
ACCGTCGCGC ATCTCGATTC GGCCCGACGC ATCGTGCTGC GGCTCGTCGA AGGCGGCTGA
 
Protein sequence
MTKQAGMEAK LDSTADAVAA SLRDMIINGE LAAGERLVER DLAERFGISR IPMREAIQRL 
EREGLLDIFR NRGAVVRMLS VSDVQEIYDL RVLLEGDAIY RSVKRLDDET LARAELVHRL
LGDATVPRRQ GELNREFHAL LYSCCGNARQ LKSIAELRGQ VERYERLQAT LLADTPSFQV
EHDDILQACL ERNARGARAM TVAHLDSARR IVLRLVEGG