| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4815 |
|---|
| Symbol | |
|---|
| ID | 4451564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1801032 |
|---|
| End bp | 1801757 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639696871 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_838442 |
|---|
| Protein GI | 116692909 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.889502 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTCA CGGGTGCCTC GAGCGGAATC GGCCGCGCAT GCGCGGTCGC GCTGGCGCAG
GCGGGTGCGC GCGTCGTCGC GGCGGGGCGC GACATGGCCG CGCTCGACAC GCTCGCCGGC
GAGATTGCGT GCGATACGTT GCGCCTGGAT GTCGGCGGCG ATCAACACGC GATCGACGCA
GCACTCGCCG CGTACGACGC GTTCGACGGC CTCGTCAATT GTGCGGGGAT CGCGTCGCTC
GAACCGGCTC TCGAGGTCTG CGCCGCGCAG TTCGACCACG TGATGGCCGT CAATGCGCGC
GGCGCGGCGC TCGTCGCGCG GGCCGTGGCG CGCAAGATGA TCGAACGCGA CGGACGCGGC
GCGGCGCACG CACGGGGCAG CATCGTCAAC GTGTCGAGTC AGGCGGCGCT CGTCGGCCTG
CCCGCGCATC TGAGCTATTG CGCATCGAAG GCAGCGATGG ACGCGATCAC GCGCGTGCTG
TGCATCGAAC TCGGGCCGCA CGGCATTCGT GTGAACAGTG TGAACCCGAC CGTCACGCTC
ACGCCGATGG CGCAGTTCGC GTGGAGCGAA CCGGAGAAGC GTGCGCCGAT GCTCGCTGCG
ATTCCGCTCG GCCGGTTCGC GGAGCCGCAC GAAGTCGTCG AACCGATCCT GTTTTTGCTG
AGCGATGCGG CGTCGATGAT CAGCGGCGTG TCGTTGCCGA TCGACGGCGG ATATACCGCG
CGCTAG
|
|---|
| Protein sequence | MLVTGASSGI GRACAVALAQ AGARVVAAGR DMAALDTLAG EIACDTLRLD VGGDQHAIDA
ALAAYDAFDG LVNCAGIASL EPALEVCAAQ FDHVMAVNAR GAALVARAVA RKMIERDGRG
AAHARGSIVN VSSQAALVGL PAHLSYCASK AAMDAITRVL CIELGPHGIR VNSVNPTVTL
TPMAQFAWSE PEKRAPMLAA IPLGRFAEPH EVVEPILFLL SDAASMISGV SLPIDGGYTA
R
|
|---|
| |