Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3533 |
Symbol | |
ID | 4452205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 371854 |
End bp | 372654 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 639695592 |
Product | TonB family protein |
Protein accession | YP_837165 |
Protein GI | 116691632 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0725055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGGC TGACGATCGA ATACGGCGTG CCGCCCGCGC GCCGGCATGC GGCACGTGCG GCGCCGCGCA CGGTGGCGGC GGTTGCGCGT CCGCCGTCGC TGCCGCCGTC CGCGCAGGTC GACGCACGGG CCGCACCGGC GAACGGATGG CGTGGCGCGG CGGCGATTGC GCTGGCGATC GCGGCGCTGC ATGCGGGCGT CGCGCTGCTG GCCGCGCGCG TGCCTGCCGC ACCGCCCGTG CAGCCGCCGC GGCCGTTGCC GATGACGGTC GAGCTGACGC GGCCGCCCGA ACCGCTGCCG CAGGCCGCGC ACCCGCCGCC GCCGGTCGTG TCGCCGAAGC CGTTGAAGCA GGCGCCGACC CCGCCGAAGC CGCGCGCGGC CGTACCGCGT CCGGCGCCGG CTGCCACGCC GCAGGCGACG CGCGAAGCCG CACCTGCACC CGCGCCGGCG ACGCCGGCCG TCGCCGCGCC CGCTGCCCCG GTTCAGGCGC CCGCGCCCGC ACCCGCCGTA CCCGTGCGCG AAACCGCGCC GATCGGCGAC GCGGCGTACC TGCGCAACCC GGCGCCCGAC TATCCGGCGT TCGCGCAGGA CCAGGGCTGG GAAGGGCGCG TCGTGCTGCG CGTGCACGTG CTCGCGAGTG GCACGCCCGA TTCGGTCGAG GTCCGCACGA GCAGCGGCCG CCGCCTGCTC GACAGCGCGG CGGTGGCTGC CGTGAAGCGC TGGACCTTCG TCCCCGCGAA GCGCGGCGAC GAAGCGGTCG ACGGCTGGGT GAACGTGCCG ATCGATTTCA AGCTGGGCTG A
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Protein sequence | MTGLTIEYGV PPARRHAARA APRTVAAVAR PPSLPPSAQV DARAAPANGW RGAAAIALAI AALHAGVALL AARVPAAPPV QPPRPLPMTV ELTRPPEPLP QAAHPPPPVV SPKPLKQAPT PPKPRAAVPR PAPAATPQAT REAAPAPAPA TPAVAAPAAP VQAPAPAPAV PVRETAPIGD AAYLRNPAPD YPAFAQDQGW EGRVVLRVHV LASGTPDSVE VRTSSGRRLL DSAAVAAVKR WTFVPAKRGD EAVDGWVNVP IDFKLG
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