| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_1172 |
|---|
| Symbol | |
|---|
| ID | 4446338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | - |
|---|
| Start bp | 1272491 |
|---|
| End bp | 1273222 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639688979 |
|---|
| Product | Hly-III family protein |
|---|
| Protein accession | YP_830666 |
|---|
| Protein GI | 116669733 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
|---|
| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCA AATCTCCCCA GCCGGGCGCG GGAGCGGGCC GCGGCCGGAA ATCAGGCCCC
ATGGACGATG CTGCAGTCCG CATCGCGGAG CTGCTGACGA TCAAACCTAA ATGGCGGGGG
TGGATCCATA CCGTCACGGC GCCGCTTGCT TTCGCCGCGG GGCTGGTCCT GATCCTGTTG
GCACCCACCA CCGACCTGAA AATCGCTTCC ACCGTCTACG CAGTGACGGG TGTGCTGCTG
TTCGGAATCA GCGCCGTGTA CCACCGCGGG AACTGGTCCC CCGCCGTCAA GATCGTCCTG
AAGCGCCTCG ACCACACCAA TATCATGCTG GTGATCGCCG GCAGCTACAC TCCCTTGGCC
TGGGCCCTGC TGGAACGGCC CAAGGCAGTG GTGCTGCTGT GGGTCATCTG GTCCGGCGCC
ATTCTGGGCG TGCTGTTCCG GCTGCTCTGG ACTCATGCGC CGCGCTGGCT GTACGTGCCC
ATCTATATTG CCCTGGGCTG CGGTTCACTG TTCTACCTGC CGGACTTTTT TGCGGCCAGC
ATTGCTTCCG CCGTGCTGAT CTGCGTGGGC GGCGCCTTGT ACATCGCCGG CGCGGTGTTC
TACGCGCTCA AAAAGCCGAA CTTCAGCTAC GAACATTTTG GCTTCCATGA GCTCTTCCAC
GCTTTCACCG TGTTCGCTTT TGCCGCGCAC TTCGTCGCCA TCGCCATAGC GGTCCTCAGC
AGGCCGGCTT AA
|
|---|
| Protein sequence | MESKSPQPGA GAGRGRKSGP MDDAAVRIAE LLTIKPKWRG WIHTVTAPLA FAAGLVLILL
APTTDLKIAS TVYAVTGVLL FGISAVYHRG NWSPAVKIVL KRLDHTNIML VIAGSYTPLA
WALLERPKAV VLLWVIWSGA ILGVLFRLLW THAPRWLYVP IYIALGCGSL FYLPDFFAAS
IASAVLICVG GALYIAGAVF YALKKPNFSY EHFGFHELFH AFTVFAFAAH FVAIAIAVLS
RPA
|
|---|
| |