Gene STER_1901 details

Gene Information

• Locus tag: STER_1901
• Symbol: rpsC
• ID: 4437527
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: -
• Start bp: 1765245
• End bp: 1765898
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 639677469
• Product: 30S ribosomal protein S3
• Protein accession: YP_821211
• Protein GI: 116628592
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0092] Ribosomal protein S3
• TIGRFAM ID: [TIGR01009] ribosomal protein S3, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.563087
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGTCAAA AAGTACATCC AATTGGTTTG CGTGTCGGGA TCATCCGTGA TTGGGATGCG 
AAATGGTATG CTGAAAAAGA ATACGCAGAT TACCTTCACG AAGATTTGGC AATCCGCAAA 
TTCATTCAAA AAGAGCTTGC AGACGCTTCA GTTTCAACTA TTGAAATCGT ACGTGCTGTA 
AACAAAGTTA TTGTTTCACT TCACACTGCT AAACCAGGTA TGGTTATCGG TAAAGGTGGA 
TCAAACGTTG ATGCTCTTCG CGCTCAACTT AACAAATTGA CTGGAAAACA AGTTCACATC 
AACATCGTTG AAATCAAAAA ACCTGATTTG GACGCTCACC TTGTTGGTGA AACTATTGCT 
CGTCAACTTG AGCAACGTGT TGCTTTCCGT CGTGCACAAA AACAAGCTAT CCAACGTGCA 
ATGCGTGCTG GAGCTAAAGG GATCAAAACT CAAGTATCAG GTCGTTTGAA CGGTGCAGAT 
ATTGCCCGTG CAGAAGGATA CTCAGAAGGG ACAGTTCCAC TTCACACACT TCGCGCTGAT 
ATCGATTACG CTTGGGAAGA AGCTCACACA ACTTACGGTA AACTTGGTGT TAAAGTTTGG 
ATCTACCGTG GAGAAGTTCT TCCAGCCCGT AAAAACACTA AAGGAGGCAA ATAA 

 

Protein sequence

MGQKVHPIGL RVGIIRDWDA KWYAEKEYAD YLHEDLAIRK FIQKELADAS VSTIEIVRAV 
NKVIVSLHTA KPGMVIGKGG SNVDALRAQL NKLTGKQVHI NIVEIKKPDL DAHLVGETIA 
RQLEQRVAFR RAQKQAIQRA MRAGAKGIKT QVSGRLNGAD IARAEGYSEG TVPLHTLRAD 
IDYAWEEAHT TYGKLGVKVW IYRGEVLPAR KNTKGGK